Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHQDLSITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQHG-------KAMYKGMIDCLMKTARAEGFFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLL---MEDGMQRNLKMEMLAGCGAGMCQVVVTCPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLAGLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVTPLDVLKTRI-----QTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQGVYFIGIGERILKCFD |
| 4C9G Chain:A ((30-293)) | --------------GGVSAAVAKTAASPIERVKLLIQNQDEMLKQGTLDRKYAGILDCFKRTATQEGVISFWRGNTANVIRYFPTQALNFAFKDKIKAMFGFKKEEGYAKWFAGNLASGGAAG--------ALSLLFVYSLDYARTRLAADS--------RQF-NGLIDVYKKT---------LKSDGVAGLYRGFLPSVVGIVVYRGLYFGMYDSL--------------LASFLLGWVVTTGASTCSYPLDTVRRRMMMTSGQAVK-------YDGAFDCLRKIVAAEGVGSLFKGCGANILRGVAGAGVISMYDQLQ---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54287 for 1624 contacts (-33.4/contact) +
2D Compatibility (PS) -23730 + (NN) 1950 + (LL) 5192
1D Compatibility (HY) -13600 + (ID) 3500
Total energy: -87975.0 ( -54.17 by residue)
QMean score : 0.172
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