Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MKNLLCLLALLLCTTVFAQPQQVVVGVSGNGYVTRQ----QDGARITQRGVTHWTNPKSIVSI-YFYLHQPTTADLSLYAKGHSEIKVSYGKKGFKVNLQSNDFTKVPVGSIDIRQAGYVRIDLQGVSKSGEGFGEIKQLIADNVTGKSNYVKDFSDYWGRRG-------PSVHL-GYALPEGDTEWFYNEITVPKEGETMHSYYMAAGFGEGYFGMQYNSPTERRILFSVWSPFDTQNPKEIPDDQKIKLLRQGKDVHIGEFGN--------EGSGGQSY--LKYPWKAGNTYKFLMQIRPDGNGNTTYTAYFYATDEKEWKLIASFLRPKTNTWYKRPHSFLENFSPEQGYLSREVFFGNQWARSKEGKWSRLTDATFTHDATASAQVRLDYQGGNTKDNRFYLKMGGFFNESVPMGTKFYCKPTGKEPEIDWEALKQL |
| 1SQ9 Chain:A ((3-395)) | KVFIATANAGKAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGA--------SNSHRLVATDVKG-TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG------LIATGFNNG--TVQISELSTLRPLYNFESQHNNSNS-----IRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPGEFAHS-SWVMSLSFNDSGETLCSAG--------WDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEH-GDSLAEPG------VFDVKFLKK---------GWRSG----------MGADLNESLCCVCL--------DRSIRWFREAG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SQ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4172 for 2893 contacts (-1.4/contact) +
2D Compatibility (PS) -36817 + (NN) -8298 + (LL) 4124
1D Compatibility (HY) -14000 + (ID) 3250
Total energy: -62413.0 ( -21.57 by residue)
QMean score : 0.157
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