Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKKTVRF-GEQAAVPAIGLGTWYMGEHA----AQRQQEVAALRAGIDHGLTVIDTAEMYADGGAEEVVGQAIRG-LRDRVVLVSKVYPW--------HAGKAAMHRACENSLRRLQTDYLDMYLLHWRGD-IPLQETVEAMEKLVAEGKIRRWGVSNLDIEDMQALWRTADGEHCATNQVLYHLASRGIEYDLLPWCQQHSLPVMAYCPLAQAG---RL-----------RDG--LFQ----------HSDIINMANARGITVAQLLLAWVIRHPGV-LAIPKAASIEHVVQNAAALDIVLSGEELAQLDRLYPPPQRKNRLDMV |
| 1PYF Chain:A ((2-312)) | ---KKAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDG---LVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIKTADVTLSQEDISFIDKLFAPG--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196019 for 2215 contacts (-88.5/contact) +
2D Compatibility (PS) -29230 + (NN) -14358 + (LL) 1124
1D Compatibility (HY) -19600 + (ID) 3800
Total energy: -261883.0 ( -118.23 by residue)
QMean score : 0.561
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