Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MNIKKLFSIFTLVILVFATACTNKSEKATVSDTNEKPKEEIKIVEPNGAEKTK-LNLNFGVGKLNISGNEEKLMKGKFIYSENEWKPEIKYEVKDKDGELEISQPGLKSGNVSLNNKRNEWNINLNEKIPTEIK-----------------LSLGTGEFKADLSKINLKELNVGMGVGKVDLDISGN---------------YKNNVKVNIEGGVGEATVYLPKSIGVKIKAEKGVGAVNANGFIVEGE----------------NIYKNSQYGKSKNSIEV-----NIEAGVGAI-----NIKQK |
| 3P4G Chain:A ((23-323)) | HSFDHYIGSAFDASNNNVAVTGNV----SATLNVLAGDDKVSIDGNVEDVLVAANVAVLDMGTGNDQLYVAGDVLGKIDAGTGNDEIYIKGDVSAAVDAGTGNDEVYIGGNLSGDLDAGTDND--NIQIGGDVNAALNAGTGNDNLIIGHDVSGIVNMGTDNDTVEVGRTINASGKVLLDTGDDSLLVSGDLFGEVDGGTGNDTIIIAGKVSGNIQGGTGNDIVRVQSQVWAEANISLGTGD---DVLIVEHELHGTVAGNEGDDSIYLKFYTKEQYNNNSDLRNRVANFEHIRVSDGVVKGSPADFADY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 61204 for 1815 contacts (33.7/contact) +
2D Compatibility (PS) -24825 + (NN) 1935 + (LL) 608
1D Compatibility (HY) -2800 + (ID) 2300
Total energy: 33822.0 ( 18.63 by residue)
QMean score : 0.176
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