Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MIFLAILDLKSLVLNAINYWGPKNNNGIQGGDFGYPISEKQIDTSIITSTHPRLIPHDLTIPQNLETIFTTTQVLTNNTDLQQSQTV-SFAKKTTTTTSTSTTNGWTEGGKISDTLEEKVSVSIPFIGEGGGKNSTTIEANFAHNSSTTTFQQASTDIEWNISQPVLVPPRKQVVATLVIMGGNFTIPMDLMTTIDST-----EHYSGYPILTWISSPDNSYNGPFMSWYFANWPNLPSGFGPLNSDNTVTYTGSVVSQVSAGVYATVRFDQYDIHNLRTIEKTWYARHATLHNGKKISINNVTEMAPTSPIKTN |
| 1UYJ Chain:A ((16-295)) | SYDNVDTLIEKGRYNTKYNYLKRMEKYYP----NAMAYFDKVTINPQGNDFYIN-NPKVELDGEPSMNYLEDV--YVGKALLTNDTQQEQKLKSQSFTCKNTDTVTATTTHTVGTSIQATAKFTVP-------FNETGVS----LTTSYSFANTNTNTNSKEITHNV-PSQDILVPANTTVEVIAYLKKVNVKGNVKLVGQVSGSEWGEIPSYLAFPRDGYKFSLSDTVNKSDLN-----------------EDGTININGKGNYSAVMGDELIVKVRNL----NTNNVQEYVIP----VDSNIVKYRSLSIKAPGI----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UYJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28512 for 1868 contacts (-15.3/contact) +
2D Compatibility (PS) -29038 + (NN) -16875 + (LL) 1312
1D Compatibility (HY) -4400 + (ID) 2100
Total energy: -79613.0 ( -42.62 by residue)
QMean score : 0.291
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