Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSYTLFEIGPFALDSFGWKETIPPKKDGDSEKVVRMASPIIVNARFSDPITGVE---KLIITNNNGKKDIFESDILTTRNL------------------PSLIKYGYSINEKYIRSLSYALQLMRDRLPLSE--LYEGVGILET---PFGYLISLDKVLKSIQFNQSSPSYPI--------VDSAYDLTPKGTFDNWFNMYIDEVKG---HLLLELA--VIFG--ISALVTSFLKHKHEIEFAGILFSFTGQSSTGKSTAAALA--------------------------VSVAGNPTKGNE---TLFRSWNATRNALEGYLSN---NYGIPIVFDELSS----TTLRDTTGLLYSIAEGQGR---------QRSNVHGEVKT-----------------PKNWGTSVISTSEYSIFNDSAQNDGLRVRTIEIN--EQFTTNATNADNIKKAVALNYGHVLP---LVAKYLIN------REDEVIQWFYKE------VDWFEAKLKDETNNTG-------------------IRMFKRYAVITTSA-----------KIL------------------GRVLSTDIDIANIRD----------------YFIDYHTHTVSERSLADKAIDVIIQ-----FVAQNRGKFS-DEGALKNMFENYGLISLKDDHIEVKII-ANVFKQMLNNHQFQDVNNV--------VNALRDKGFILADRGRQTTKRSVKDNSGKKQSLVFY----HLKLDVEFASILGLTKDKSLLQNWTPSNDNKAAKELFKSANEGIGPSGV-HEDF------------
4CKB Chain:A ((1-844))MDANVVSSSTIATYIDALAKNASELEINNELELVFIKPPLITLTNVVNISTIQESFIRFTVTNKEGVKIRTKIPLSKVHGLDVKNVQLVDAIDNIVWEKKSLVTENRLHKECLLRLSTEERHIFLDYKKYGSSIRLELVNLIQAKTKNFTIDFKLKYFLGSGAQSKSSLLHAINHPKSRPNTSLEIEFTPRDNETVPYDELIKELTTLSRHIFMASPENVILSPPINAPIKTFMLPKQDIVGLDLENLYAVTKTDGIPITIRVTSNGLYCYFTHLGYIIRYPVKRIIDSEVVVFGEAVKDKNWTVYLIKLIENDRLEESKYVESKLVDICDRIVFKSKKYEGPFTTTSEVVDMLSTYLPKQPEGVILFYSKGPKSNIDFKIKKENTIDQTANVVFRMSSEPIIFGESSIFVEYKKFSNDKGFPKEYGSGKIVLYNGVNYLNNIYCLEYINTHNEVGIKSVVVPIKFIAEFLVNGEILKPRIDKTMKYINSEDYYGNQHNIIVEHLRDQSIKIGDINDKFRLNPEVTRGPLGILSNYVKTLLISMYCSKTFLDDSNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDRIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDFATIIE--RSKKFINGASTMEDRPSTRNFFELNRGAIKCEGLDVEDLLSYYVVYVFSKR


General information:
TITO was launched using:
RESULT:

Template: 4CKB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45801 for 3858 contacts (-11.9/contact) +
2D Compatibility (PS) -61997 + (NN) -2612 + (LL) 228
1D Compatibility (HY) -31200 + (ID) 5450
Total energy: -146832.0 ( -38.06 by residue)
QMean score : 0.207

(partial model without unconserved sides chains):
PDB file : Tito_4CKB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CKB-query.scw
PDB file : Tito_Scwrl_4CKB.pdb: