Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSYTLFEIGPFALDSFGWKETIPPKKDGDSEKVVRMASPIIVNARFSDPITGVE---KLIITNNNGKKDIFESDILTTRNL------------------PSLIKYGYSINEKYIRSLSYALQLMRDRLPLSE--LYEGVGILET---PFGYLISLDKVLKSIQFNQSSPSYPI--------VDSAYDLTPKGTFDNWFNMYIDEVKG---HLLLELA--VIFG--ISALVTSFLKHKHEIEFAGILFSFTGQSSTGKSTAAALA--------------------------VSVAGNPTKGNE---TLFRSWNATRNALEGYLSN---NYGIPIVFDELSS----TTLRDTTGLLYSIAEGQGR---------QRSNVHGEVKT-----------------PKNWGTSVISTSEYSIFNDSAQNDGLRVRTIEIN--EQFTTNATNADNIKKAVALNYGHVLP---LVAKYLIN------REDEVIQWFYKE------VDWFEAKLKDETNNTG-------------------IRMFKRYAVITTSA-----------KIL------------------GRVLSTDIDIANIRD----------------YFIDYHTHTVSERSLADKAIDVIIQ-----FVAQNRGKFS-DEGALKNMFENYGLISLKDDHIEVKII-ANVFKQMLNNHQFQDVNNV--------VNALRDKGFILADRGRQTTKRSVKDNSGKKQSLVFY----HLKLDVEFASILGLTKDKSLLQNWTPSNDNKAAKELFKSANEGIGPSGV-HEDF------------ |
4CKB Chain:A ((1-844)) | MDANVVSSSTIATYIDALAKNASELEINNELELVFIKPPLITLTNVVNISTIQESFIRFTVTNKEGVKIRTKIPLSKVHGLDVKNVQLVDAIDNIVWEKKSLVTENRLHKECLLRLSTEERHIFLDYKKYGSSIRLELVNLIQAKTKNFTIDFKLKYFLGSGAQSKSSLLHAINHPKSRPNTSLEIEFTPRDNETVPYDELIKELTTLSRHIFMASPENVILSPPINAPIKTFMLPKQDIVGLDLENLYAVTKTDGIPITIRVTSNGLYCYFTHLGYIIRYPVKRIIDSEVVVFGEAVKDKNWTVYLIKLIENDRLEESKYVESKLVDICDRIVFKSKKYEGPFTTTSEVVDMLSTYLPKQPEGVILFYSKGPKSNIDFKIKKENTIDQTANVVFRMSSEPIIFGESSIFVEYKKFSNDKGFPKEYGSGKIVLYNGVNYLNNIYCLEYINTHNEVGIKSVVVPIKFIAEFLVNGEILKPRIDKTMKYINSEDYYGNQHNIIVEHLRDQSIKIGDINDKFRLNPEVTRGPLGILSNYVKTLLISMYCSKTFLDDSNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDRIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDFATIIE--RSKKFINGASTMEDRPSTRNFFELNRGAIKCEGLDVEDLLSYYVVYVFSKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CKB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45801 for 3858 contacts (-11.9/contact) +
2D Compatibility (PS) -61997 + (NN) -2612 + (LL) 228
1D Compatibility (HY) -31200 + (ID) 5450
Total energy: -146832.0 ( -38.06 by residue)
QMean score : 0.207
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