Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
3P30 Chain:A ((538-664))
--------------------------TVQVRKLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARV-----------------------------------------------WLQWDKEISNYTHIIYELIEESQKQQEKNEQELLELD
General information:
TITO was launched using:
RESULT:
Template:
3P30.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8367 for 420 contacts (19.9/contact) +
2D Compatibility (PS) -8789 + (NN) -2943 + (LL) 4532
1D Compatibility (HY) -11200 + (ID) 3550
Total energy: -13583.0 ( -32.34 by residue)
QMean score : 0.268
(partial model without unconserved sides chains):
PDB file :
Tito_3P30.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P30-query.scw
PDB file :
Tito_Scwrl_3P30.pdb
: