Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTQQLYFLNDIGKQKPESIRNR--SAACPFCDRENLTD---ILA-----TEGSIIWLKNKFPTLKD------------TFQTVLIETDNCEDHIATYTEEHMRSLIRFSIKHWLNLQKNEEFTSVILYKNHGPFSGGSLHHAHMQIIGMKYVNYLDNVEQDNFQGV-----------------IVQKNEHIELNISDRPIIGFTEFNIIIEDI---------GCIDELANYIQQTVRYILTDFHKGCSSYNLFFYYLN----------EKIICKVVPRFVVSPLY-VGYKIPQVSTKIEDVKIQLAAYFTKQNDAIIHKKIE |
| 1Z84 Chain:A ((30-347)) | VTNRWVIFSP-----RPTDFKSKSP-SSCPFCIGREQECAPELFRVPDHDPNWKLRVIENLYPALSRNLETQSRTIVGFGFHDVVIESPVHSIQLSDIDPVGIGDILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMALPVVPPTVSSRLDGTKDYFEETGKCCLCEAKSKHFVIDESSH-FVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQL--NDPPYNYMIHTSPLKVTESQLPYTHWFLQIVPQLSGVGGFEIGTGCYINPVFPEDVAKVMRE--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z84.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116534 for 1807 contacts (-64.5/contact) +
2D Compatibility (PS) -25918 + (NN) -9145 + (LL) 1760
1D Compatibility (HY) -12400 + (ID) 1950
Total energy: -164187.0 ( -90.86 by residue)
QMean score : 0.317
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