Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKLHLKYLWIVLVACTLTACMNGGGDLAGKWQLRQYQYADGTSEKVDSVFYN-FQKGSFSAICLLKDGG-LTTFFGNYSLKGAEISIILLPESVNDKNYDTYFGWPEGKCTF-KVEDLSYSSLRLEYEG-TKSIFRKF
3HTY Chain:A ((1-94))
------------------------GASIVGSWVEPV----PGLEGQVQG--IKMEEGGVASSV------NMATLVYESWKQEGT--KLILTGKSIGNGQTIEFVD-------TMDIKRLTADSLVLDNQGMEIRYAKQK
General information:
TITO was launched using:
RESULT:
Template:
3HTY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18746 for 541 contacts (-34.7/contact) +
2D Compatibility (PS) -9673 + (NN) 94 + (LL) 4188
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -27787.0 ( -51.36 by residue)
QMean score : 0.345
(partial model without unconserved sides chains):
PDB file :
Tito_3HTY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HTY-query.scw
PDB file :
Tito_Scwrl_3HTY.pdb
: