Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKTNKIIFIVFIVIFIGLSYRHFTNTDKARMEISSLSS-IDVFKFNSFSKFSNDKIGVIYDEEKLSKFKVIMNSLDTSEGIKKIEVPKDANIESFKYSYHIQPNLKYVEDNNVYDGYFLLYILVGDSEGKSYIIFSGTELSYVLDKNNTNILKEIFLNVKKQQ-- |
2JTD Chain:A ((1-122)) | EEEMKRLLAL-------SQEHKFPTVPTKSELAVEILEKGQVRFWMQAEKLSSNAKVSYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQIQD---------------------GKATGHSTLVLIG----------------DVYKKLQKEAEF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3555 for 780 contacts (4.6/contact) +
2D Compatibility (PS) -12470 + (NN) -1469 + (LL) 3856
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -11978.0 ( -15.36 by residue)
QMean score : 0.299
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