Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYMKKLKFITLTLAIIITLPMLQSCLDDNDHQSRSLVISTINQISEDSKEFYFTLDNGKTMFPSNSQAWGGEKFENGQRAFVIFNELEQPVNGYDYNIQVRDITKVLTKEIVTMDDEENTEEKIGDDKINATY-M-WISKDKKYLTIEFQYYSTHSEDKKHFLNLVINNKEADSAAENEDNTDDEYINLEFRHNSERDSPDHLGEGYVSFKLDKIEEQIEGKKGLNIRVRTLYDGIKNYKVQFP------------ |
3K0Y Chain:A ((10-228)) | ----------------------------------DIWIAVATVVPEGNNVYYLRLDDGDKLWPAATNY-PNYQPKPNQRALVNFTILAD-----SHYIKVNAIHNILTKSIAKNEG-AANDSIYGTDPVSIYNNNMWIGDG--YLNIYFETLW--GGKTAHFINLI------------QPDAENDPYTLEFRHNAYDDPQYTIGAGRVAFNLSSLPDTKGETVDLVVNYWT-SEGKQAYKLKYNSDKTKMNITDMK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K0Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41027 for 1289 contacts (-31.8/contact) +
2D Compatibility (PS) -19526 + (NN) -4664 + (LL) 4264
1D Compatibility (HY) -13200 + (ID) 2450
Total energy: -76603.0 ( -59.43 by residue)
QMean score : 0.302
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