@TOME V2.2
(Nov 2016)

Ref. - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : EAA2_HUMAN: (2015-12-07 )
MASTEGANNMPKQVEVRMHDSHLGSEEPKHRHLGLRLCDKLGKNLLLTLTVFGVILGAVCGGLLRLASPIHPDVVMLIAFPGDILMRMLKMLILPLIISSLITGLSGLDAKASGRLGTRAMVYYMSTTIIAAVLGVILVLAIHPGNPKLKKQLGPGKKNDEVSSLDAFLDLIRNLFPENLVQACFQQIQTVTKKVLVAPPPDEEANATSAVVSLLNETVTEVPEETKMVIKKGLEFKDGMNVLGLIGFFIAFGIAMGKMGDQAKLMVDFFNILNEIVMKLVIMIMWYSPLGIACLICGKIIAIKDLEVVARQLGMYMVTVIIGLIIHGGIFLPLIYFVVTRKNPFSFFAGIFQAWITALGTASSAGTLPVTFRCLEENLGIDKRVTRFVLPVGATINMDGTALYEAVAAIFIAQMNGVVLDGGQIVTVSLTATLASVGAASIPSAGLVTMLLILTAVGLPTEDISLLVAVDWLLDRMRTSVNVVGDSFGAGIVYHLSKSELDTIDSQHRVHEDIEMTKTQSIYDDMKNHRESNSNQCVYAAHNSVIVDECKVTLAANGKSADCSVEEEPWKREK

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TB1_E_5(2NWW)
?
[Raw transfer]




TB1_D_4(2NWW)
?
[Raw transfer]




ASP_C_6(3KBC)
?
[Raw transfer]




ASP_A_4(3KBC)
?
[Raw transfer]




ASP_B_5(3KBC)
?
[Raw transfer]




ASP_B_8(3V8F)
?
[Raw transfer]




ASP_C_12(3V8F)
?
[Raw transfer]




TB1_F_6(2NWW)
?
[Raw transfer]




ASP_C_14(4IZM)
?
[Raw transfer]




ASP_A_4(3V8F)
?
[Raw transfer]




ASP_A_6(4IZM)
?
[Raw transfer]




ASP_B_10(4IZM)
?
[Raw transfer]




ASP_A_4(4X2S)
?
[Raw transfer]




ASP_B_7(4X2S)
?
[Raw transfer]




ASP_C_10(4X2S)
?
[Raw transfer]




ASP_A_10(2NWX)
?
[Raw transfer]




ASP_A_10(2NWX)
?
[Raw transfer]




ASP_A_10(2NWX)
?
[Raw transfer]




ASP_D_4(2NWL)
?
[Raw transfer]




ASP_D_4(2NWL)
?
[Raw transfer]




ASP_D_4(2NWL)
?
[Raw transfer]




ASP_D_4(2NWL)
?
[Raw transfer]




3 PsiBlast_PDB 86.1331%-140 - C7 -2NWW 3.1 ?
31 PsiBlast_CBE 85.1631%-137 - C7 -2NWW 3.4 ?
30 PsiBlast_CBE 84.9531%-138 - C7 -2NWW 4.8 ?
70 Fugue 84.9335%-126 - C7 -4OYF - ? -
60 HHSearch 84.6634%-144 - C7 -2NWL 4.7 ?
39 PsiBlast_CBE 84.6132%-144 - C7 -3V8F 3.2 ?
40 PsiBlast_CBE 84.5332%-145 - C7 -3V8F 3.4 ?
8 PsiBlast_PDB 84.4232%-145 - C7 -3V8F 3.5 ?
2 PsiBlast_PDB 84.3831%-133 - C7 -1XFH - ? -
36 PsiBlast_CBE 84.3131%-148 - C7 -3V8G - ? -
5 PsiBlast_PDB 83.6931%-139 - C7 -4OYF - ? -
69 Fugue 83.5032%-141 * C7 *1XFH - ? -
55 PsiBlast_CBE 83.5031%-131 - C7 -4OYG - ? -
33 PsiBlast_CBE 83.4831%-148 - C7 -3V8G - ? -
14 PsiBlast_PDB 83.4731%-131 - C7 -4OYG - ? -
34 PsiBlast_CBE 83.4631%-146 - C7 -3V8G - ? -
51 PsiBlast_CBE 83.4531%-131 - C7 -4OYG - ? -
4 PsiBlast_PDB 83.2331%-138 - C7 -2NWX 4.1 ?
37 PsiBlast_CBE 83.2131%-143 - C7 -3KBC 4.1 ?
11 PsiBlast_PDB 83.1831%-146 - C7 -4P3J - ? -
38 PsiBlast_CBE 83.1331%-143 - C7 -3KBC 4.1 ?
7 PsiBlast_PDB 83.1231%-143 - C7 -3KBC 4.1 ?
13 PsiBlast_PDB 82.7331%-133 - C7 -4IZM 4.0 ?
29 PsiBlast_CBE 82.7131%-140 - C7 -2NWX 4.5 ?
56 PsiBlast_CBE 82.6031%-135 - C7 -2NWL 4.4 ?
49 PsiBlast_CBE 82.5831%-135 - C7 -4IZM 3.9 ?
16 PsiBlast_PDB 82.4231%-134 - C7 -2NWL 4.7 ?
50 PsiBlast_CBE 81.7731%-130 - C7 -4IZM 5.0 ?
1 PsiBlast_PDB 81.2932%-146 - C7 -4X2S 3.8 ?
28 PsiBlast_CBE 80.7331%-136 - C7 -2NWX 4.6 ?
21 PsiBlast_CBE 80.4832%-144 - C7 -4X2S 3.3 ?
22 PsiBlast_CBE 80.4232%-144 - C7 -4X2S 3.6 ?
57 PsiBlast_CBE 80.3831%-138 - C7 -2NWL 4.5 ?