@TOME V2.2
(Nov 2016)

Ref. - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : EAA1_HUMAN: (2015-12-07 )
MTKSNGEEPKMGGRMERFQQGVRKRTLLAKKKVQNITKEDVKSYLFRNAFVLLTVTAVIVGTILGFTLRPYRMSYREVKYFSFPGELLMRMLQMLVLPLIISSLVTGMAALDSKASGKMGMRAVVYYMTTTIIAVVIGIIIVIIIHPGKGTKENMHREGKIVRVTAADAFLDLIRNMFPPNLVEACFKQFKTNYEKRSFKVPIQANETLVGAVINNVSEAMETLTRITEELVPVPGSVNGVNALGLVVFSMCFGFVIGNMKEQGQALREFFDSLNEAIMRLVAVIMWYAPVGILFLIAGKIVEMEDMGVIGGQLAMYTVTVIVGLLIHAVIVLPLLYFLVTRKNPWVFIGGLLQALITALGTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGATINMDGTALYEALAAIFIAQVNNFELNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRHELKNRDVEMGNSVIEENEMKKPYQLIAQDNETEKPIDSETKM

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ASP_B_7(4X2S)
?
[Raw transfer]



ASP_A_4(4X2S)
?
[Raw transfer]



ASP_C_10(4X2S)
?
[Raw transfer]



TB1_E_5(2NWW)
?
[Raw transfer]



ASP_C_12(3V8F)
?
[Raw transfer]



ASP_A_4(3V8F)
?
[Raw transfer]



TB1_D_4(2NWW)
?
[Raw transfer]



ASP_B_8(3V8F)
?
[Raw transfer]



ASP_C_14(4IZM)
?
[Raw transfer]



ASP_A_6(4IZM)
?
[Raw transfer]



TB1_F_6(2NWW)
?
[Raw transfer]



ASP_A_10(2NWX)
?
[Raw transfer]



ASP_A_10(2NWX)
?
[Raw transfer]



ASP_B_10(4IZM)
?
[Raw transfer]



ASP_C_6(3KBC)
?
[Raw transfer]



ASP_A_4(3KBC)
?
[Raw transfer]



ASP_B_5(3KBC)
?
[Raw transfer]



ASP_A_10(2NWX)
?
[Raw transfer]



ASP_D_4(2NWL)
?
[Raw transfer]



ASP_D_4(2NWL)
?
[Raw transfer]



ASP_D_4(2NWL)
?
[Raw transfer]



ASP_D_4(2NWL)
?
[Raw transfer]
48 PsiBlast_CBE 92.9432%-138 - C6 -3V8F 3.3 ?
69 Fugue 92.5835%-123 - C6 -4OYF - ? -
58 HHSearch 92.3634%-129 - C6 -2NWL 4.7 ?
7 PsiBlast_PDB 92.0232%-135 - C6 -4P1A - ? -
47 PsiBlast_CBE 91.7732%-138 - C6 -3V8F 3.3 ?
12 PsiBlast_PDB 91.5332%-138 - C6 -3V8F 3.4 ?
49 PsiBlast_CBE 91.2132%-137 - C6 -3KBC 4.1 ?
42 PsiBlast_CBE 91.0832%-135 - C6 -3V8G - ? -
8 PsiBlast_PDB 91.0632%-138 - C6 -4P3J - ? -
10 PsiBlast_PDB 90.9232%-136 - C6 -3V8G - ? -
13 PsiBlast_PDB 90.8932%-136 - C6 -3KBC 4.1 ?
50 PsiBlast_CBE 90.8032%-136 - C6 -3KBC 4.1 ?
6 PsiBlast_PDB 90.4832%-135 - C6 -4P19 - ? -
54 PsiBlast_CBE 90.3232%-129 - C6 -4OYG - ? -
16 PsiBlast_PDB 90.3232%-131 - C6 -2NWL 4.7 ?
53 PsiBlast_CBE 90.2332%-130 - C6 -4OYG - ? -
52 PsiBlast_CBE 90.1532%-130 - C6 -4OYG - ? -
15 PsiBlast_PDB 89.9232%-136 - C6 -4OYE - ? -
51 PsiBlast_CBE 89.7732%-129 - C6 -4OYG - ? -
14 PsiBlast_PDB 89.7732%-130 - C6 -4OYG - ? -
1 PsiBlast_PDB 89.7333%-134 - C6 -4X2S 3.4 ?
56 PsiBlast_CBE 89.6132%-133 - C6 -2NWL 4.4 ?
30 PsiBlast_CBE 89.4232%-127 - C6 -2NWW 4.8 ?
57 PsiBlast_CBE 89.3932%-134 - C6 -2NWL 4.5 ?
3 PsiBlast_PDB 89.2132%-129 - C6 -2NWW 3.1 ?
29 PsiBlast_CBE 88.9732%-126 - C6 -2NWX 4.5 ?
31 PsiBlast_CBE 88.6132%-126 - C6 -2NWW 3.4 ?
21 PsiBlast_CBE 88.2533%-134 - C6 -4X2S 3.3 ?
22 PsiBlast_CBE 88.1633%-134 - C6 -4X2S 3.5 ?
28 PsiBlast_CBE 87.9732%-126 - C6 -2NWX 4.6 ?
4 PsiBlast_PDB 87.7232%-126 - C6 -2NWX 4.1 ?
45 PsiBlast_CBE 87.4032%-126 - C6 -4IZM 3.8 ?
11 PsiBlast_PDB 87.2832%-124 - C6 -4IZM 3.9 ?
46 PsiBlast_CBE 86.2032%-122 - C6 -4IZM 5.0 ?