@TOME V2.2
(Nov 2016)

Ref. - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : ADT3_HUMAN: (2015-12-07 )
MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKSGTEREFRGLGDCLVKITKSDGIRGLYQGFSVSVQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIFRDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKVI

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CDL_A_4(2C3E)
ADT1_BOVIN
[Raw transfer]




CDL_A_4(1OKC)
ADT1_BOVIN
[Raw transfer]




CDL_A_4(1OKC)
ADT1_BOVIN
[Raw transfer]




CDL_A_5(4C9J)
ADT3_YEAST
[Raw transfer]




CDL_A_5(4C9Q)
ADT3_YEAST
[Raw transfer]




CDL_B_9(4C9J)
ADT3_YEAST
[Raw transfer]




CDL_B_9(4C9Q)
ADT3_YEAST
[Raw transfer]




CDL_A_5(4C9H)
ADT2_YEAST
[Raw transfer]




CM5_A_7(4C9H)
ADT2_YEAST
[Raw transfer]




CDL_A_5(1OKC)
ADT1_BOVIN
[Raw transfer]




22 Fugue 89.3890% -83 * C5 *1OKC 5.2 ADT1_BOVIN
12 HHSearch 89.1689% -83 - C5 -1OKC 5.8 ADT1_BOVIN
1 PsiBlast_PDB 89.1689% -83 - C5 -1OKC 5.8 ADT1_BOVIN
2 PsiBlast_PDB 88.1989% -82 - C5 -2C3E 5.3 ADT1_BOVIN
10 PsiBlast_CBE 77.8453% -76 - C5 -4C9J 3.6 ADT3_YEAST
9 PsiBlast_CBE 74.5553% -72 - C5 -4C9Q 5.4 ADT3_YEAST
4 PsiBlast_PDB 74.1353% -73 - C5 -4C9Q 5.0 ADT3_YEAST
5 PsiBlast_PDB 74.0853% -73 - C5 -4C9H 2.5 ADT2_YEAST
3 PsiBlast_PDB 73.8453% -74 - C5 -4C9J 4.9 ADT3_YEAST
11 PsiBlast_CBE 71.9753% -69 - C5 -4C9H 3.0 ADT2_YEAST
23 Fugue 54.7124% -98 * C6 *4J1Q - -
27 Fugue 51.7913% -76 - C4 -1WKV - CYSO_AERPE -
14 HHSearch 51.6223% -48 - C5 -1OKC - ADT1_BOVIN -
6 PsiBlast_PDB 49.7026% -56 - C5 -2LCK - UCP2_MOUSE -
13 HHSearch 46.0926% -53 - C5 -2LCK - UCP2_MOUSE -
24 Fugue 44.7519% -68 - C2 -1CJD - CAPSD_BPPRD -
29 Fugue 43.6516% -48 - C6 -1ISA - SODF_ECOLI -
30 Fugue 43.1116% -84 - C1 -4R8G - -
15 HHSearch 38.7722% -48 - C5 -2LCK - UCP2_MOUSE -
7 PsiBlast_PDB 38.5156% -10 - C5 -3G9K - CAPD_BACAN -