@TOME V2.2
(Nov 2016)

Ref. - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : AAAT_HUMAN: (2015-12-07 )
MVADPPRDSKGLAAAEPTANGGLALASIEDQGAAAGGYCGSRDQVRRCLRANLLVLLTVVAVVAGVALGLGVSGAGGALALGPERLSAFVFPGELLLRLLRMIILPLVVCSLIGGAASLDPGALGRLGAWALLFFLVTTLLASALGVGLALALQPGAASAAINASVGAAGSAENAPSKEVLDSFLDLARNIFPSNLVSAAFRSYSTTYEERNITGTRVKVPVGQEVEGMNILGLVVFAIVFGVALRKLGPEGELLIRFFNSFNEATMVLVSWIMWYAPVGIMFLVAGKIVEMEDVGLLFARLGKYILCCLLGHAIHGLLVLPLIYFLFTRKNPYRFLWGIVTPLATAFGTSSSSATLPLMMKCVEENNGVAKHISRFILPIGATVNMDGAALFQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVNLPVDHISLILAVDWLVDRSCTVLNVEGDALGAGLLQNYVDRTESRSTEPELIQVKSELPLDPLPVPTEEGNPLLKHYRGPAGDATVASEKESVM

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ASP_B_7(4X2S)
?
[Raw transfer]



ASP_C_10(4X2S)
?
[Raw transfer]



ASP_A_4(4X2S)
?
[Raw transfer]



TB1_D_4(2NWW)
?
[Raw transfer]



ASP_B_8(3V8F)
?
[Raw transfer]



TB1_E_5(2NWW)
?
[Raw transfer]



ASP_C_14(4IZM)
?
[Raw transfer]



ASP_C_12(3V8F)
?
[Raw transfer]



ASP_A_4(3V8F)
?
[Raw transfer]



ASP_A_6(4IZM)
?
[Raw transfer]



ASP_A_10(2NWX)
?
[Raw transfer]



ASP_B_5(3KBC)
?
[Raw transfer]



ASP_A_4(3KBC)
?
[Raw transfer]



ASP_C_6(3KBC)
?
[Raw transfer]



ASP_A_10(2NWX)
?
[Raw transfer]



TB1_F_6(2NWW)
?
[Raw transfer]



ASP_A_10(2NWX)
?
[Raw transfer]



ASP_B_10(4IZM)
?
[Raw transfer]



ASP_D_4(2NWL)
?
[Raw transfer]



ASP_D_4(2NWL)
?
[Raw transfer]



ASP_D_4(2NWL)
?
[Raw transfer]



ASP_D_4(2NWL)
?
[Raw transfer]
69 Fugue 92.8935%-142 - C4 -4OYF - ? -
58 HHSearch 89.2531%-151 - C4 -2NWL 4.0 ?
41 PsiBlast_CBE 88.8131%-144 - C4 -3V8G - ? -
4 PsiBlast_PDB 88.7231%-142 - C4 -2NWL 4.0 ?
14 PsiBlast_PDB 88.2531%-151 - C4 -4P1A - ? -
7 PsiBlast_PDB 88.1731%-139 - C4 -2NWX 3.6 ?
68 Fugue 88.1431%-143 * C4 *1XFH - ? -
45 PsiBlast_CBE 87.9031%-151 - C4 -3V8G - ? -
28 PsiBlast_CBE 87.8531%-142 - C4 -2NWL 3.9 ?
25 PsiBlast_CBE 87.8131%-141 - C4 -4OYG - ? -
15 PsiBlast_PDB 87.7831%-153 - C4 -4P3J - ? -
35 PsiBlast_CBE 87.7731%-140 - C4 -2NWX 3.9 ?
13 PsiBlast_PDB 87.6931%-151 - C4 -4P19 - ? -
6 PsiBlast_PDB 87.6331%-141 - C4 -2NWW 3.0 ?
42 PsiBlast_CBE 87.4931%-151 - C4 -3V8G - ? -
27 PsiBlast_CBE 87.4231%-141 - C4 -4OYG - ? -
2 PsiBlast_PDB 87.4031%-141 - C4 -4OYG - ? -
8 PsiBlast_PDB 87.3931%-147 - C4 -4OYF - ? -
24 PsiBlast_CBE 87.3631%-141 - C4 -4OYG - ? -
26 PsiBlast_CBE 87.3231%-140 - C4 -4OYG - ? -
56 PsiBlast_CBE 87.1631%-148 - C4 -3KBC 3.7 ?
1 PsiBlast_PDB 87.1532%-154 - C4 -4X2S 3.2 ?
40 PsiBlast_CBE 86.9031%-151 - C4 -3V8F 3.9 ?
9 PsiBlast_PDB 86.7631%-151 - C4 -3V8F 3.9 ?
17 PsiBlast_PDB 86.7431%-148 - C4 -3KBC 3.7 ?
57 PsiBlast_CBE 86.6031%-148 - C4 -3KBC 3.7 ?
37 PsiBlast_CBE 86.5831%-141 - C4 -2NWW 4.8 ?
39 PsiBlast_CBE 86.5631%-151 - C4 -3V8F 3.9 ?
38 PsiBlast_CBE 86.3631%-141 - C4 -2NWW 3.7 ?
22 PsiBlast_CBE 86.1032%-149 - C4 -4X2S 3.3 ?
21 PsiBlast_CBE 85.7732%-150 - C4 -4X2S 2.9 ?
12 PsiBlast_PDB 85.5931%-139 - C4 -4IZM 4.8 ?
46 PsiBlast_CBE 85.4931%-141 - C4 -4IZM 5.2 ?
29 PsiBlast_CBE 84.8231%-142 - C4 -2NWL 3.8 ?
36 PsiBlast_CBE 84.7231%-141 - C4 -2NWX 4.0 ?
47 PsiBlast_CBE 84.3431%-137 - C4 -4IZM 4.6 ?