@TOME V2.2
(Nov 2016)

Ref. - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : T0807: (2014-06-05 )
MVKKTVRFGEQAAVPAIGLGTWYMGEHAAQRQQEVAALRAGIDHGLTVIDTAEMYADGGAEEVVGQAIRGLRDRVVLVSKVYPWHAGKAAMHRACENSLRRLQTDYLDMYLLHWRGDIPLQETVEAMEKLVAEGKIRRWGVSNLDIEDMQALWRTADGEHCATNQVLYHLASRGIEYDLLPWCQQHSLPVMAYCPLAQAGRLRDGLFQHSDIINMANARGITVAQLLLAWVIRHPGVLAIPKAASIEHVVQNAAALDIVLSGEELAQLDRLYPPPQRKNRLDMV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_A_2(1US0)
ALDR_HUMAN
[Raw transfer]



NDP_A_3(3D3F)
GR_BACSU
[Raw transfer]



EDO_A_10(4F40)
PGFS_LEIMA
[Raw transfer]



GOL_A_6(3O0K)
?
[Raw transfer]



GLU_A_3(4FZI)
PGFS_TRYCC
[Raw transfer]



CIT_E_5(1VBJ)
PGFS_TRYBB
[Raw transfer]



EDO_A_12(4F40)
PGFS_LEIMA
[Raw transfer]



GOL_D_12(3O0K)
?
[Raw transfer]
25 HHSearch 92.8028%-118 - C3 -1PYF - IOLS_BACSU -
30 HHSearch 89.9530%-107 - C3 -3N2T - ? -
34 HHSearch 89.8531%-110 - C3 -1LQA - TAS_ECOLI -
49 HHSearch 89.4330%-124 - C3 -1US0 11.9 ALDR_HUMAN
39 HHSearch 88.9029%-117 - C3 -1MI3 - XYL1_CANTE -
2 PsiBlast_PDB 88.7727%-124 - C3 -1PYF - IOLS_BACSU -
3 PsiBlast_PDB 88.5627%-120 - C3 -1PZ0 - IOLS_BACSU -
26 HHSearch 87.9233%-122 - C3 -3F7J - GR_BACSU -
8 Fugue 87.9025%-114 - C3 -1QRQ - KCAB2_RAT -
29 HHSearch 87.5833%-107 - C3 -1PZ1 - GS69_BACSU -
6 PsiBlast_PDB 87.1133%-113 - C3 -3D3F 11.6 GR_BACSU
17 SP3 86.9825%-111 - C3 -1VP5 - ? -
31 HHSearch 86.9728%-123 - C3 -1YNP - ? -
43 HHSearch 86.9026%-114 - C3 -3EAU - KCAB2_RAT -
40 HHSearch 86.9025%-115 - C3 -1QWK - ? -
22 SP3 86.5828%-103 - C3 -1LQA - TAS_ECOLI -
37 HHSearch 86.4631%-117 - C3 -4GIE - PGFS_TRYCC -
20 SP3 85.8925%-106 - C3 -1J96 - AK1C2_HUMAN -
19 SP3 85.3624%-109 - C3 -1EXB - KCAB2_RAT -
33 HHSearch 85.3131%-108 - C3 -3O0K 3.1 ?


User Run . : Multi Template Modeling Result:

(3 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_A_2(1US0)
ALDR_HUMAN
[Raw transfer]



NDP_A_3(3D3F)
GR_BACSU
[Raw transfer]



EDO_A_10(4F40)
PGFS_LEIMA
[Raw transfer]



GOL_A_6(3O0K)
?
[Raw transfer]



GLU_A_3(4FZI)
PGFS_TRYCC
[Raw transfer]



CIT_E_5(1VBJ)
PGFS_TRYBB
[Raw transfer]



EDO_A_12(4F40)
PGFS_LEIMA
[Raw transfer]



GOL_D_12(3O0K)
?
[Raw transfer]
64 99.90100%-126 - C- -M064 - -
70 99.08100%-126 - C- -M070 - -
67 97.78100%-124 - C- -M067 - -