@TOME V2.2
(Nov 2016)

Ref. - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : T0787: (2014-05-21 )
AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_3(4DZU)
?
[Raw transfer]




ACE_B_13(1JEK)
?
[Raw transfer]




IPA_A_4(3O42)
?
[Raw transfer]




GOL_A_3(4DZV)
?
[Raw transfer]




36 HHSearch 89.7284% -32 - C2 -3P30 - ? -
2 PsiBlast_PDB 83.3458% -32 - C2 -3P30 - ? -
35 HHSearch 78.8573% -53 - C2 -1ENV - -
34 HHSearch 73.8048% -35 - C2 -1QBZ - ? -
1 PsiBlast_PDB 73.6958% -52 - C2 -1ENV - -
12 PsiBlast_PDB 73.5747% -35 - C2 -1QBZ - ? -
22 Fugue 67.8348% -26 - C2 -1QCE - ? -
9 PsiBlast_PDB 66.1547% -26 - C2 -2EZQ - ? -
10 PsiBlast_PDB 66.0747% -31 - C2 -2EZP - ? -
7 PsiBlast_PDB 66.0547% -33 - C2 -2EZS - ? -
13 PsiBlast_PDB 64.6047% -28 - C2 -1QCE - ? -
11 PsiBlast_PDB 64.5347% -32 - C2 -2EZO - ? -
8 PsiBlast_PDB 63.3947% -30 - C2 -2EZR - ? -
39 HHSearch 62.6476% 2 - C2 -3K9A - ? -
6 PsiBlast_PDB 62.5754% -29 - C2 -3WFV - ? -
3 PsiBlast_PDB 59.8551% -24 - C2 -3CP1 - ENV_HV1LW -
16 PsiBlast_PDB 59.8150% -29 - C2 -4DZU 3.3 ?
5 PsiBlast_PDB 57.8350% -22 - C2 -3CYO - ? -
37 HHSearch 57.7248% -13 - C2 -1JQ0 - ? -
4 PsiBlast_PDB 57.6253% -28 - C2 -3MA9 - ? -


User Run . : Multi Template Modeling Result:

(2 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_3(4DZU)
?
[Raw transfer]




ACE_B_13(1JEK)
?
[Raw transfer]




IPA_A_4(3O42)
?
[Raw transfer]




GOL_A_3(4DZV)
?
[Raw transfer]




76 82.35100% -53 - C- -M076 - -
68 82.01100% -52 - C- -M068 - -