@TOME V2.2
(Nov 2016)

Ref. - Doc.
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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : GHC1_HUMAN: (2015-12-08 )
MADKQISLPAKLINGGIAGLIGVTCVFPIDLAKTRLQNQQNGQRVYTSMSDCLIKTVRSEGYFGMYRGAAVNLTLVTPEKAIKLAANDFFRHQLSKDGQKLTLLKEMLAGCGAGTCQVIVTTPMEMLKIQLQDAGRIAAQRKILAAQGQLSAQGGAQPSVEAPAAPRPTATQLTRDLLRSRGIAGLYKGLGATLLRDVPFSVVYFPLFANLNQLGRPASEEKSPFYVSFLAGCVAGSAAAVAVNPCDVVKTRLQSLQRGVNEDTYSGILDCARKILRHEGPSAFLKGAYCRALVIAPLFGIAQVVYFLGIAESLLGLLQDPQA

Atome Classification :

(20 SA) ------.........10.......-.20........30........40----..--------...--------....50........60.-----....---...70.---.......80........90.----..-----..-.-----------.-----.100..--------..-----...-110.......120.----......130-..-.--..----..140.......150...----------....160.......170----..-......180.......190.......200....--------------...210.......220-----.......---.230.------......240..------.....-----250.--.--.....260......-----..270.......280....-...290...---....300.......310....-...320.-------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ------MADKQISLPAKLINGGIA-GLIGVTCVFPIDLAKTRLQNQQ-----NG--------QRV--------YTSMSDCLIKTVRSEGY-----FGMY---RGAAVN---LTLVTPEKAIKLAANDFFRH----QL-----SK-D-----------G-----QKLTLL--------KE-----MLA-GCGAGTCQVIVTTP----MEMLKIQLQ-DA-G--RI----AAQRKILAAQGQLSAQGG----------AQPSVEAPAAPRPTAT-----QL-TRDLLRSRGIAGLYKGLGATLLRDVPFSVVYFP--------------LFANLNQLGRPASEE------KSPFYVS---FLAGC------VAGSAAAVAVN------PCDVV-----KTRL--Q--SLQRGV-NEDTYSG-----ILDCARKILRHEGPSAFLK-GAYCRALVI---APLFGIAQVVYFLGIAESLLG-LLQDPQA-------
2 PsiBlast_PDB 85.9124% -54 - C3 -2C3E ADT1_BOVIN A:[1-278] -------SDQALSFLKDFLAGGVA-AAISKTAVAPIERVKLLLQVQH-----AS--------KQISAEKQ---YKGIIDCVVRIPKEQGF-----LSFW---RGNLAN---VIRYFPTQALNFAFKDKYKQIFLGGV-----DR-H-----------K-----QFWRYF--------AG-----NLASGGAAGATSLCFVYP----LDFARTRLAADV-G--KG----AAQREFTGLGNCIT----------------------------------------KIFKSDGLRGLYQGFNVSVQGIIIYRAAYFG--------------VYDTAK--GMLPDPK------NVHIIVS---WMIAQ------TVTAVAGLVSY------PFDTV-----RRRMMMQ--SGRKGA--DIMYTG-----TVDCWRKIAKDEGPKAFFK-GAWSNVLRG---MGGAFVLVLYDEI-----------------------
3 PsiBlast_PDB 85.5425% -58 - C3 -4C9J ADT3_YEAST A:[25-302] -----------TNFAINFLMGGVS-AAIAKTAASPIERVKILIQNQD-----EMIKQGTL--DKK--------YSGIVDCFKRTAKQEGL-----ISFW---RGNTAN---VIRYFPTQALNFAFKDKIKL----MFGFK--KE-E-----------G-----YGKWFA--------GN-----LAS-GGAAGALSLLFVYS----LDF---------------------ARTRLAADAKS---------------ARQF--------NGLT-----DV-YKKTLKSDGIAGLYRGFMPSVVGIVVYRGLYFG--------------MFDSLK-------------------------FLLGW------VVTTGASTCSY------PLDTV-----RRRM------MMTSG-QAVKYNG-----AIDCLKKIVASEGVGSLFK-G--CGANIL---RSVAGAGVISMYDQLQMILFG-KKF-----------
4 PsiBlast_PDB 84.1625% -62 - C3 -4C9Q ADT3_YEAST A:[23-302] ---------QETNFAINFLMGGVS-AAIAKTAASPIERVKILIQNQD-----EMIKQGTL--DKK--------YSGIVDCFKRTAKQEGL-----ISFW---RGNTAN---VIRYFPTQALNFAFKDKIKL----MFGFK--KE-------------G-----YGKWFA--------GN-----LAS-GGAAGALSLLFVYS----LDF---------------------ARTRLAADAKS---------------ARQF--------NGLT-----DV-YKKTLKSDGIAGLYRGFMPSVVGIVVYRGLYFG--------------MFDSLKPL----------------FLAS---FLLGW------VVTTGASTCSY------PLDTV-----RRRM------MMTSG-QAVKYNG-----AIDCLKKIVASEGVGSLFK-G--CGANIL---RSVAGAGVISMYDQLQMILFG-K-------------
20 Fugue 80.8122% -58 * C3 *1OKC ADT1_BOVIN A:[2-293] --------DQALSFLKDFLAGGVA-AAISKTAVAPIERVKLLLQVQHASKQISA--------EKQ--------YKGIIDCVVRIPKEQGF-----LSFW---RGNLAN---VIRYFPTQALNFAFKDKYKQ----IFLGGVDRH-K-----------Q-----FWRYFA--------GN-----LAS-GGAAGATSLCFVYP----LDFARTRLA-A----------------------------------------DVGKGAAQREFTGLG-----NC-ITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFG--------------VYDTAKGMLP--DPK------NVHIIVS---WMIAQ------TVTAVAGLVSY------PFDTV-----RRRM--MM-QSGRKG-ADIMYTG-----TVDCWRKIAKDEGPKAFFK-G------AW---SNVLRGMGGAFVLVLYDEI-----------------
11 HHSearch 80.4422% -51 - C3 -1OKC ADT1_BOVIN A:[2-293] --------DQALSFLKDFLAGGVA-AAISKTAVAPIERVKLLLQVQH-----ASKQISA---EKQ--------YKGIIDCVVRIPKEQGF-----LSFW---RGNLAN---VIRYFPTQALNFAFKDKYKQ----IF-----LG-G-----------VDRHKQFWRYFA--------GN-----LAS-GGAAGATSLCFVYP----LDFARTRLA-AD-V--GK----GAAQ---------------------------------REFTGLG-----NC-ITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFG--------------VYDTAKGMLPDPK--------NVHIIVS---WMIAQ------TVTAVAGLVSY------PFDTV-----RRRM--M--MQSGRKGADIMYTG-----TVDCWRKIAKDEGPKAFFK-GAWSNVLRG---MG-GAFVLVLYDEI----------------------
28 Fugue 79.7118% -50 - C1 -1ZY7 RED1_HUMAN A:[8-402] SRQPIPSEGLQLHLPQVLADAVSR-LVLGKFGDLTDNFSSPHARRKV-----LA--------GVV--------MTTGTDVKDAKVISVSTGTKCINGEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELY----LN-----NK-D-----------D-----QKRSIF--------QKSERGGFRL-KENVQFHLYISTSP----CGDARI-FK-AR-G--QL------RTKIESGEGTIPVRSN----------ASIQTWDGVLQGERLL-----TMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILG--------------SLYHGDHLSRAMYQRISNIEDLPPLYTLNKPLLSGISNAEARQPGKAPNFSVNWTVGDSAIEVINATTGKDEL--G--RASRLC-KHALYCR-----WMRVHGKVPSHLLRSKITKPNVYHESKLA---AKEYQAAKARLFTAFIKAGLGAWVEKPTEQDQFSLT
1 PsiBlast_PDB 77.9724% -51 - C3 -1OKC ADT1_BOVIN A:[2-278] --------DQALSFLKDFLAGGVA-AAISKTAVAPIERVKLLLQVQH-----AS--------KQISAEKQ---YKGIIDCVVRIPKEQGF-----LSFW---RGNLAN---VIRYFPTQALNFAFKDKYKQIFLGGV-----DR-H-----------K-----QFWRYF--------AG-----NLASGGAAGATSLCFVYP----LDFARTRLAADV-G--KG----AAQREFTGLGNCIT----------------------------------------KIFKSDGLRGLYQGFNVSVQGIIIYRAAYFG--------------VYDTAK--GMLPDPK------NVHIIVS---WMIAQ------TVTAVAGLVSY------PFDTV-----RRRMMMQ--SGRKGA--DIMYTG-----TVDCWRKIAKDEGPKAFFK-GAWSNVLRG---MGGAFVLVLYDEI-----------------------
10 HHSearch 77.7124% -60 - C3 -2LCK - UCP2_MOUSE A:[14-303] --------------TVKFLGAGTA-ACIADLITFPLDTAKVRLQIQG-----ESQGLVRTAASAQ--------YRGVLGTILTMVRTEGP-----RSLY---NGLVAG---LQRQMSFASVRIGLYDSVKQ----FY-----TK-G-----------S-----EHAGIG--------SR-----LLA-GSTTGALAVAVAQP----TDVVKVRFQ-AQ-A--RA----GGG----------------------------------RRYQSTV-----EA-YKTIAREEGIRGLWKGTSPNVARNAIVNCAELV--------------TYDLIKDTLLKANLM------TDDLPCH---FTSAF------GAGFCTTVIAS------PVDVV-----KTRY--M--NSALG-----QYHS-----AGHCALTMLRKEGPRAFYK-GFMPSFLRL---GSWNVVMFVTYEQLKRALMAA-YQSREAP-------
5 PsiBlast_PDB 75.4225% -48 - C3 -4C9G ADT2_YEAST A:[27-287] -----------------FLMGGVS-AAVAKTAASPIERVKLLIQNQD-----EMLKQGTL--DRK--------YAGILDCFKRTATQEGV-----ISFW---RGNTAN---VIRYFPTQALNFAFKDKIKA----MFGFK--KE-E-----------G-----YAKWFA--------GN-----LAS-GGAAGALSLLFVYS----LDY---------------------ARTRLAADS------------------RQFNGLIDVYKKT--------------LKSDGVAGLYRGFLPSVVGIVVYRGLYFG--------------MYDSL--------------------LAS---FLLGW------VVTTGASTCSY------PLDTV-----RRRM------MMTSG-QAVKYDG-----AFDCLRKIVAAEGVGSLFK-GCGANILRG---VAGAGVISMYDQLQ----------------------
6 PsiBlast_PDB 73.4725% -47 - C3 -4C9H ADT2_YEAST A:[27-287] -----------------FLMGGVS-AAVAKTAASPIERVKLLIQNQD-----EMLKQGTL--DRK--------YAGILDCFKRTATQEGV-----ISFW---RGNTAN---VIRYFPTQALNFAFKDKIKA----MFGFK--KE-E-----------G-----YAKWFA--------GN-----LAS-GGAAGALSLLFVYS----LDY---------------------ARTRLAADS-----------------ARQFNGLIDVYKKT--------------LKSDGVAGLYRGFLPSVVGIVVYRGLYFG--------------MYDSLK-------------------LAS---FLLGW------VVTTGASTCSY------PLDTV-----RRRM------MMTSG-QAVKYDG-----AFDCLRKIVAAEGVGSLFK-GCGANILRG---VAGAGVISMYDQLQMILFGKK-FK------------
7 PsiBlast_PDB 71.9025% -47 - C3 -2LCK - UCP2_MOUSE A:[13-272] -------------MTVKFLGAGTA-ACIADLITFPLDTAKVRLQIQG-----ES--------QGLVRTAASAQYRGVLGTILTMVRTEGP-----RSLY---NGLVAG---LQRQMSFASVRIGLYDSVKQ----FY-----TK-G-----------S-----EHAGIG--------SR-----LLA-GSTTGALAVAVAQP----TDVVKVRFQ-AQ-A--RA----GGGRRY-----------------------QSTVEA-----------------YKTIAREEGIRGLWKGTSPNVARNAIVNCAELV--------------TYDLIKDTLLKANLM------TDDLPCH---FTSAF------GAGFCTTVIAS------PVDVV-----KTRY--M--NSALG-----QYHS-----AGHCALTMLRKEGPRAFYK-GFMPSFLRL---GSWNVVMFVTYEQLKRALMAA-YQSREAP-------
22 Fugue 68.7017% -68 - C3 -2Y23 A:[6-312] --------TKEV-----VVNVDDD-GVISLNFECDKMTPKSEFSWSK-----D--------------------YVSTEDSPRLEVESKG---------------NKTK---MTF----KDLGMDDLGIYSC----DV-----TDTD-----------G-----IASSYLID------EE-----ELK-RLLALSHEHKFPTVPV--KSELAVEIL-EK-GQVRF----WMQAEKLSGNAKVNYIFN----------EKEIFEGPKYKMHIDRNTGIIEM-FMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGD--------------VFKKLQKEAEFQRQEWIRK--QGPHFVE---YLSWE------VTGEC----------------------NVLL--K--CKVANI-KKETHIV-----WYKDEREISVDE------K-HGICTLLITEFSKKDAGIYEVILKDDRGKDKSR-LKLVDEA-------
25 Fugue 61.8512% -35 * C4 *1H74 KHSE_METJA A:[1-296] -------MKVRVKAPCTSANLGVGFDVFGLCLKEPYDVIEVEAIDDK-----E-----------------------------IIIEVDDK-----------------N---IPTDPDKNVAGIVAKKMIDD----FN-----IG-K-----------G-----VKITIK--------KG-----VKA-GSGLGSSAASSAGT----AYAIN-ELF-KL-N--LD----KLKLVDYASYGELASSGA----------KHADNVAPAIFGGFTM-----VT-NYEPLEVLHI---------PIDFKLDILIAIPN--------------ISINTKEAREILPKA------VGLKDLV---NNVGK------ACGMVYALYNK------DKSLF-----GRYM--MSDKVIEPV-RGKLIPN------YFKIKEEVKDKVYGITIS-GSGPSIIAF---PKEEFIDEVENILRDYYENTI-RTEVGKGVEVV---
27 Fugue 60.0112% -35 - C4 -1FWK KHSE_METJA A:[1-296] -------MKVRVKAPCTSANLGVGFDVFGLCLKEPYDVIEVEAIDDK-----E-----------------------------IIIEVDDK-----------------N---IPTDPDKNVAGIVAKKMIDD----FN-----IG-K-----------G-----VKITIK--------KG-----VKA-GSGLGSSAASSAGT----AYAIN-ELF-KL-N--LD----KLKLVDYASYGELASSGA----------KHADNVAPAIFGGFTM-----VT-NYEPLEVLHI---------PIDFKLDILIAIPN--------------ISINTKEAREILPKA------VGLKDLV---NNVGK------ACGMVYALYNK------DKSLF-----GRYM--MSDKVIEPV-RGKLIPN-----YFKIKEE-VKDKVYGITIS-GSGPSIIAF---PKEEFIDEVENILRDYYENTI-RTEVGKGVEVV---
21 Fugue 59.2812% -48 - C4 -3SKV ? A:[28-384] ------RARADRSVSPTDPALTYR-GAVSLQDRDG-WLAPWRAPHED-----AY--------LYF--------PKGSVGRLAQTSGVRLH-----LRTD---SPWLAV---RYEAVGPKPKPGEPQEPALL----DV-----LV-D-----------G-----ELARTVELKLDADAEL-----HVD-GLPAGDKLVELWLPTLLQFRLAEVRLE-AG-A--TLEKDTSSKPHWIHYGDSICHGRG----------AASPSRTWLALAARAE-----GL-DLQSLSFAADGSHLQPMFARLIRDLPADLISLRVGTSNFMDGDGFVDFPANLVGFVQIIRER------HPLTPIV---LGSSV------YSPFWDELPAD------DKPTV-----ADYR--E--QVVKVA-ELLRKHGDQNVHYLD-GMRVWGPERGMELYL-EKPDKYPTH---PNAVGHEIFAE--SSRREMAA-LGVLPVR-------
13 HHSearch 57.0519% -41 - C3 -1OKC ADT1_BOVIN A:[110-293] -----------RYFAGNLASGGAA-GATSLCFVYPLDFARTRLAADV-----GKGAA-----QRE--------FTGLGNCITKIFKSDGL-----RGLY---QGFNVS---VQGIIIYRAAYFGVYDTAKG----ML-----PD-P-----------K------NVHII--------VS-----WMI-AQTVTAVAGLVSYP----FDTVRRRMM-MQ-S--GR----KGA---------------------------------DIMYTGTV-----DC-WRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLV--------------LYDEI----------------------------------------------------------------------------------------------------------------------------------------------------------------
12 HHSearch 54.2524% -41 - C3 -2LCK - UCP2_MOUSE A:[114-302] -----------AGIGSRLLAGSTT-GALAVAVAQPTDVVKVRFQAQA-----RAGG------GRR--------YQSTVEAYKTIAREEGI-----RGLW---KGTSPN---VARNAIVNCAELVTYDLIKD----TL-----LK-AN----------L-----MTDDLP--------CH-----FTS-AFGAGFCTTVIASP----VDVVKTRYM-NS-A--L------------------------------------------GQYHSAG-----HC-ALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFV--------------TYEQLKRALMAAYQS------REAPF-------------------------------------------------------------------------------------------------------------------------------------------
24 Fugue 53.2313% -53 - C2 -3SKQ - MDM38_YEAST A:[23-249] ------KLIEIRKKTSEFLHETLE-ES------------NLITYNTI-----EN--------AEK--------KQKFLNFFRKLYSAKEG-----KI---------------MTFQHDEISAIAQ--MFKN----DS-----VL-D-----------N-----LSRPQL--------AA-----MSK-FMSLRP-----FGN----DNMLRYQIR-SKLK--DI----MNDDKTIDYEG--------------------------VESLSQE-----EL-YQACVS-RGM----KAYGVS----------KED--------------LVDNLKVWLELRLRQ------KIPSVLM---VLSST------FT-----FGGL------PKENY-----SKAF--S--PLAEKK-ETKS------------------------------------------KYDDLLDLYYDGILQVLSS-IPDPVYN-------
14 HHSearch 48.3512% -33 - C3 -3F2E ? A:[8-90] -------------------------------------------------------------------------FTAVAEQVSAVLSQYGI-----TGPN---RAIYQG---FGLKVARALNRLGGGPALVN----MI-----NG-LKAYYISAFNANP-----TVLDAV--------TD-----IIT-GSPTGYVS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 40.4024% -7 - C3 -3GWZ ? A:[186-266] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSLT-EA-G--QV----AAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVA-----EE-ARELLTGRGLADRCEILPGDFFETIPDGADVYL--------------IKHVLHDWDDDDVVR------ILRRIAT---AMKPD------SRLLVIDNLID------ERPAA-----STLF--V--DLLLLV-LVGGAER-----SESEFAALLEKSGLRVERS-LPCGAGPVR---IVEIRRA-----------------------------