@tome V2.1
Ref.
-
-
Doc.
Global output mode :
Group entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Selected Ligands Contact
Catalytic Site Atlas
Show alignment :
Best alignments
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
Structural Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Modeller Score
Verify3D Model Score
QMean Model Score
Hide column
Complexes Prediction
Show Ligands of Templates
Comparative Docking Score
Virtual Screening Score
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Comparative Docking Tab
Atome Color :
Mutated
Helix
Strand
Conserved
Query sequence : >T0680: (2012-05-22 )
MSIRWMMAAGLAALTLSGCASNDPAPLEQMRLTEQALEQAKAVGATDDVAELKLAQDKYAAAQIAMTAESYKKARLLAEQAELDARLAESKVLTQKSKDQLGELDKSLKRLRKQLGETD
Atome Classification :
.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSIRWMMAAGLAALTLSGCASNDPAPL---EQ-MRLTEQ----ALE-QAKAVGATDDVAELKLAQDKYAA-AQIAMTAESYKKARLLAEQAE--LD-ARLAESKVLTQK--------SKDQLGELDKSLKRLRKQL-GETD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
Fugue
84.92
20%
-54.75
- C2 -
2CO5
-
?
A:
[5-96]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
Y
M
R
I
N
Y
Y
I
I
L
K
V
L
V
I
N
G
------
S
R
L
---
E
K
-
K
R
L
R
S
E
----
I
L
K
-
R
F
D
I
---------------
D
I
S
D
-
G
V
L
Y
P
L
I
D
S
L
I
D
D
K
I
L
R
E
E
E
A
--
P
D
-
G
K
V
L
---
F
L
T
E
K
--------
G
M
K
E
F
E
E
L
H
E
F
F
K
K
I
V
C
H
H
-
H
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast
77.24
36%
-4.00
- C2 -
2NUP
-
SC23A_HUMAN
A:
[510-563]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
Q
-
T
Q
I
Q
N
I
A
A
S
F
D
Q
E
----
A
A
A
I
--
L
M
-
A
R
L
A
I
Y
R
A
E
T
E
-----------
D
V
L
R
W
L
D
R
Q
L
I
R
L
C
Q
K
F
-
G
E
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast
75.92
36%
-2.50
- C2 -
2NUT
-
SC23A_HUMAN
A:
[510-563]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
Q
-
T
Q
I
Q
N
I
A
A
S
F
D
Q
E
----
A
A
A
I
--
L
M
-
A
R
L
A
I
Y
R
A
E
T
E
-----------
D
V
L
R
W
L
D
R
Q
L
I
R
L
C
Q
K
F
-
G
E
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast
75.92
36%
2.08
- C2 -
3EGX
-
SC23A_HUMAN
A:
[506-559]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
Q
-
T
Q
I
Q
N
I
A
A
S
F
D
Q
E
----
A
A
A
I
--
L
M
-
A
R
L
A
I
Y
R
A
E
T
E
-----------
D
V
L
R
W
L
D
R
Q
L
I
R
L
C
Q
K
F
-
G
E
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast
75.31
36%
1.36
- C2 -
3EGD
-
SC23A_HUMAN
A:
[506-559]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
Q
-
T
Q
I
Q
N
I
A
A
S
F
D
Q
E
----
A
A
A
I
--
L
M
-
A
R
L
A
I
Y
R
A
E
T
E
-----------
D
V
L
R
W
L
D
R
Q
L
I
R
L
C
Q
K
F
-
G
E
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast
75.22
36%
7.41
- C2 -
3EFO
-
SC23A_HUMAN
A:
[506-559]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
Q
-
T
Q
I
Q
N
I
A
A
S
F
D
Q
E
----
A
A
A
I
--
L
M
-
A
R
L
A
I
Y
R
A
E
T
E
E
--------
G
P
D
V
L
R
W
L
D
R
Q
L
I
R
L
C
Q
K
F
-
G
E
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast
75.15
36%
2.29
- C2 -
3EG9
-
SC23A_HUMAN
A:
[506-559]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
Q
-
T
Q
I
Q
N
I
A
A
S
F
D
Q
E
----
A
A
A
I
--
L
M
-
A
R
L
A
I
Y
R
A
E
T
E
E
--------
G
P
D
V
L
R
W
L
D
R
Q
L
I
R
L
C
Q
K
F
-
G
E
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
31
SP3
65.49
15%
-17.74
- C2 -
1QSA
21
SLT_ECOLI
A:
[1-618]
DS
L
D
E
Q
R
S
R
Y
A
Q
I
K
Q
A
W
D
N
RQ
M
D
V
V
E
Q
M
MPGLKDYPL
Y
P
Y
L
E
Y
R
Q
I
T
D
DLMNQP
A
V
T
V
T
N
F
V
R
A
N
P
TL
P
P
A
R
T
L
Q
S
R
F
V
N
E
L
A
R
R
ED
W
R
G
L
L
A
F
SPEKPGT
T
E
A
Q
C
N
Y
Y
Y
A
K
W
N
T
GQ
S
E
E
A
W
Q
G
A
K
E
L
W
LTGKSQPNAC
D
K
L
F
S
V
W
R
A
S
GKQD
P
L
A
Y
L
E
R
I
R
L
A
M
K
A
GN
T
G
L
V
T
V
L
A
G
Q
MPADYQTI
A
S
A
I
I
S
L
A
N
NPNT
V
L
T
F
A
R
T
T
G
A
T
D
F
T
R
Q
M
A
A
V
A
F
A
S
V
A
R
------
Q
D
A
---
E
N
-
A
R
L
M
I
P
----
S
L
A
-
Q
A
Q
Q
L
N
-----
E
D
Q
I
Q
E
L
R
D
I
V
A
-
W
R
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G
N
D
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T
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E
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A
K
W
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A
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S
-
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R
R
V
R
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A
L
--------
G
T
G
D
R
R
G
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N
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W
L
A
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E
A
-
K
E
K
D
E
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R
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W
Q
A
D
L
L
L
E
R
GR
E
A
E
A
K
E
I
L
H
Q
L
M
Q
Q
RG
F
Y
P
M
V
A
A
Q
R
I
G
E
E
Y
E
L
K
I
D
K
A
P
QNVDSALTQG
P
E
M
A
R
V
R
E
L
M
Y
W
NL
D
N
T
A
R
S
E
W
A
N
L
V
KSKS
K
T
E
Q
A
Q
L
A
R
Y
A
F
N
N
QW
W
D
L
S
V
Q
A
T
I
A
G
KLWDH
L
E
E
R
F
PLAY
N
D
L
F
K
R
Y
T
S
GKEIP
Q
S
Y
A
M
A
I
A
R
Q
E
SAWNPKVKSPV
G
A
S
G
LMQIM
P
G
T
A
T
H
T
V
K
M
F
SIPGYSSPGQLLD
P
E
T
N
I
N
I
G
T
S
Y
L
Q
Y
V
Y
Q
Q
F
GNN
R
I
F
S
S
A
A
Y
N
AG
P
G
R
V
R
T
W
L
G
N
S
AGRID
A
V
A
F
V
E
S
IPF
S
E
T
R
G
Y
V
K
N
V
L
A
Y
D
A
Y
Y
R
Y
F
M
GDKPTLMS
A
T
E
W
G
RRY
33
HHSearch
59.90
21%
1.07
* C2 *
1O3U
-
?
A:
[12-44]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
M
D
A
A
K
D
D
L
E
H
-
A
K
H
D
L
E
H
G
F
Y
N
W
A
C
F
S
S
Q
Q
A
A
--
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast
55.71
31%
33.49
- C2 -
3IEG
-
DNJC3_MOUSE
A:
[278-325]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
C
H
C
F
S
K
D
E
K
P
V
---
E
A
-
I
R
I
C
S
E
----
V
L
Q
M
E
P
D
N
V
N
A
L
K
D
R
A
E
A
Y
L
I
E
E
M
Y
D
E
-
A
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34
HHSearch
54.29
28%
-4.22
- C2 -
1UFB
-
?
A:
[8-39]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
E
Q
A
R
H
N
L
R
H
-
A
Q
G
S
L
G
L
G
D
Y
A
W
A
C
F
A
A
Q
Q
A
A
--
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
Fugue
52.33
22%
8.81
- C2 -
1JB0
-
PSAM_THEEB
M:
[1-31]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
A
L
T
D
T
----
Q
V
Y
-
V
A
L
V
I
A
L
L
P
A
V
L
A
F
R
L
S
T
E
L
Y
K
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35
HHSearch
51.88
24%
-8.50
- C2 -
1WOL
1
?
A:
[7-39]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
W
I
K
Q
A
E
R
D
L
E
E
-
A
R
Y
A
K
S
G
G
Y
Y
E
L
A
C
F
L
S
Q
Q
C
A
--
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29
Fugue
48.33
16%
-10.04
- C2 -
1REG
-
REGA_BPT4
X:
[1-122]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIEIT
L
K
K
P
E
D
F
L
K
V
K
E
T
L
T
R
M
G
I
A
N
N
K
D
K
V
L
---
Y
Q
S
C
H
I
L
Q
K
KGLY
Y
I
V
-
H
F
K
E
M
L
R
M
D
G
R
Q
V
E
M
T
E
E
D
E
V
R
R
-
D
S
I
A
W
L
L
E
D
W
G
L
I
E
I
V
P
G
Q
R
T
--
F
M
K
D
L
T
N
N
F
R
V
I
S
F
K
--------
Q
K
H
E
W
------
K
L
V
P
K
Y
T
I
-
G
N
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26
Fugue
47.62
27%
1.88
- C2 -
1GK6
-
GCN4_YEAST (first)
A:
[2-56]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
K
Q
L
E
D
K
V
E
E
L
L
S
K
N
Y
H
--
L
E
-
N
E
V
A
R
L
K
K
L
V
G
D
--------
L
L
N
V
K
M
A
L
D
I
E
I
A
T
Y
R
K
L
L
E
G
E
E
S
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38
HHSearch
46.92
26%
12.42
- C2 -
3M91
-
ARC_MYCTU
A:
[8-49]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
R
D
I
H
---
Q
--
L
E
-
A
R
I
D
S
L
A
A
R
N
S
K
--------
L
M
E
T
L
K
E
A
R
Q
Q
L
L
A
L
R
E
E
V
-
D
R
L
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
36
HHSearch
44.03
19%
-28.59
- C2 -
3LS0
-
?
A:
[16-60]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
YS
P
E
K
-
I
A
Q
-----------------
L
Q
V
Y
V
N
P
I
A
V
A
R
D
G
M
E
K
R
L
Q
G
L
I
A
D
Q
N
W
V
D
T
Q
T
Y
I
H
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast
43.98
44%
77.62
- C2 -
3ZX6
-
?
A:
[24-50]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
A
E
V
P
H
Q
N
--------
R
A
D
E
I
G
I
L
A
K
S
I
E
R
L
R
R
S
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
Fugue
41.59
26%
43.98
- C2 -
2FOT
-
C:
[20-42]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
S
P
W
K
S
A
R
L
M
V
H
T
V
A
--
T
F
-
N
S
I
K
E
R
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30
Fugue
39.82
24%
9.05
- C2 -
1HYW
-
VHTJ_LAMBD
A:
[1-58]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
T
R
Q
E
E
L
A
A
A
R
A
A
--
L
H
-
D
L
M
T
G
K
R
V
A
T
V
Q
K
DG
R
R
V
E
F
T
A
T
S
V
S
D
L
K
K
Y
I
A
E
L
E
V
Q
T
-
G
M
T
Q
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
User Run . : Multi Template Modeling Result:
.........10........20........30........40........50........60........70........80........90........100.......110.......
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MSIRWMMAAGLAALTLSGCASNDPAPLEQMRLTEQALEQAKAVGATDDVAELKLAQDKYAAAQIAMTAESYKKARLLAEQAELDARLAESKVLTQKSKDQLGELDKSLKRLRKQLGETD
48
47.72
100%
17.07
- C- -
M048
-
A:
[7-119]
M
S
I
R
W
M
M
A
A
G
L
A
A
L
T
L
S
G
C
A
S
N
D
P
A
P
L
E
Q
M
R
L
T
E
Q
A
L
E
Q
A
K
A
---------------
K
Y
A
A
A
Q
I
A
M
T
A
E
S
Y
K
K
A
R
L
L
A
E
Q
A
E
L
D
A
R
L
A
E
S
K
V
L
T
Q
K
S
K
D
Q
L
G
E
L
D
K
S
L
K
R
L
R
K
Q
L
G
E
T
D
52
43.86
100%
24.27
- C- -
M052
-
A:
[7-119]
M
S
I
R
W
M
M
A
A
G
L
A
A
L
T
L
S
G
C
A
S
N
D
P
A
P
L
E
Q
M
R
L
T
E
Q
A
L
E
Q
A
K
A
---------------
K
Y
A
A
A
Q
I
A
M
T
A
E
S
Y
K
K
A
R
L
L
A
E
Q
A
E
L
D
A
R
L
A
E
S
K
V
L
T
Q
K
S
K
D
Q
L
G
E
L
D
K
S
L
K
R
L
R
K
Q
L
G
E
T
D
47
40.81
100%
30.28
- C- -
M047
-
A:
[7-119]
M
S
I
R
W
M
M
A
A
G
L
A
A
L
T
L
S
G
C
A
S
N
D
P
A
P
L
E
Q
M
R
L
T
E
Q
A
L
E
Q
A
K
A
---------------
K
Y
A
A
A
Q
I
A
M
T
A
E
S
Y
K
K
A
R
L
L
A
E
Q
A
E
L
D
A
R
L
A
E
S
K
V
L
T
Q
K
S
K
D
Q
L
G
E
L
D
K
S
L
K
R
L
R
K
Q
L
G
E
T
D
49
38.87
100%
37.92
- C- -
M049
-
A:
[7-119]
M
S
I
R
W
M
M
A
A
G
L
A
A
L
T
L
S
G
C
A
S
N
D
P
A
P
L
E
Q
M
R
L
T
E
Q
A
L
E
Q
A
K
A
---------------
K
Y
A
A
A
Q
I
A
M
T
A
E
S
Y
K
K
A
R
L
L
A
E
Q
A
E
L
D
A
R
L
A
E
S
K
V
L
T
Q
K
S
K
D
Q
L
G
E
L
D
K
S
L
K
R
L
R
K
Q
L
G
E
T
D
56
30.02
100%
45.87
- C- -
M056
-
A:
[7-123]
M
S
I
R
W
M
M
A
A
G
L
A
A
L
T
L
S
G
C
A
S
N
D
P
A
P
L
E
Q
M
R
L
T
E
Q
A
L
E
Q
A
K
A
V
G
A
T
D
D
V
A
E
L
K
L
A
Q
D
K
Y
A
A
A
Q
I
A
M
T
A
E
S
Y
K
K
A
R
L
L
A
E
Q
A
E
L
D
A
R
L
A
E
S
K
V
L
T
Q
K
S
K
D
Q
L
G
E
L
D
K
S
L
K
R
L
R
K
Q
L
G
E
T
D