@tome V2.1
Ref.
-
-
Doc.
Global output mode :
Group entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Selected Ligands Contact
Catalytic Site Atlas
Show alignment :
Best alignments
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
Structural Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Modeller Score
Verify3D Model Score
QMean Model Score
Hide column
Complexes Prediction
Show Ligands of Templates
Comparative Docking Score
Virtual Screening Score
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Comparative Docking Tab
Atome Color :
Mutated
Helix
Strand
Conserved
Query sequence : >T0676: (2012-05-18 )
MIIMNKFTILFLTLFLALPMAMKADSAKEKKDDTRYLVGAVPEVDGKVVFSKEFQIPGMSQAQIYDTMTKWMDERLKENKNIDSRIVFSDEAKGTIAGVGEEWIVFSSSALSLDRTLVNYQITVTCKPGNCLVELEKIRFTYRETEKYKAEEWITDKYALNKAKTKLVRGLAKWRRKTVDFADDMFMDVAVAFGAPDTRPKTEK
Atome Classification :
.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770.......780.......
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIIMNKFTILFLTLFLALPMAMKADSAKEKKDD------TRYL-VGAV-PEVDG-KVVFSKEFQIP--GMSQAQIYDT--------MTKWMD-ERLKEN-KNIDSRIVFSDEA-KGTIAGVGEE-----------------------WIVFSSSALSL--DRTLVNYQIT-VTCKPGN-----CLVELE-KIRFTYRETEK-YKAEEWITD---KYALNKAKTKLVRG--------------------LAKWRRKTVDFADD------MFMDVAVAFGAPDTRPKT-EK------------------------------------------------------------
6
PsiBlast
73.90
31%
2.63
- C7 -
1GQL
1
?
A:
[34-78]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
---
S
P
T
I
N
A
A
A
A
E
L
Q
R
G
--------------------
L
S
G
L
L
N
K
P
I
V
A
R
D
E
------
K
L
K
D
Y
S
L
V
I
G
T
P
D
N
S
P
-----------------------------------------------------------------
2
PsiBlast
72.74
31%
5.94
- C7 -
1H41
2
?
B:
[34-78]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
---
S
P
T
I
N
A
A
A
A
E
L
Q
R
G
--------------------
L
S
G
L
L
N
K
P
I
V
A
R
D
E
------
K
L
K
D
Y
S
L
V
I
G
T
P
D
N
S
P
-----------------------------------------------------------------
1
PsiBlast
72.68
31%
3.40
- C7 -
1H41
2
?
A:
[34-78]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
---
S
P
T
I
N
A
A
A
A
E
L
Q
R
G
--------------------
L
S
G
L
L
N
K
P
I
V
A
R
D
E
------
K
L
K
D
Y
S
L
V
I
G
T
P
D
N
S
P
-----------------------------------------------------------------
5
PsiBlast
72.28
31%
2.34
- C7 -
1GQK
1
?
A:
[34-78]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
---
S
P
T
I
N
A
A
A
A
E
L
Q
R
G
--------------------
L
S
G
L
L
N
K
P
I
V
A
R
D
E
------
K
L
K
D
Y
S
L
V
I
G
T
P
D
N
S
P
-----------------------------------------------------------------
3
PsiBlast
72.08
31%
3.13
- C7 -
1GQI
1
?
A:
[34-78]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
---
S
P
T
I
N
A
A
A
A
E
L
Q
R
G
--------------------
L
S
G
L
L
N
K
P
I
V
A
R
D
E
------
K
L
K
D
Y
S
L
V
I
G
T
P
D
N
S
P
-----------------------------------------------------------------
4
PsiBlast
71.86
31%
-2.02
- C7 -
1GQJ
1
?
A:
[34-78]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
---
S
P
T
I
N
A
A
A
A
E
L
Q
R
G
--------------------
L
S
G
L
L
N
K
P
I
V
A
R
D
E
------
K
L
K
D
Y
S
L
V
I
G
T
P
D
N
S
P
-----------------------------------------------------------------
22
SP3
63.40
7%
27.56
* C6 *
1IM3
-
US02_HCMVA
D:
[1-95]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
W
F
Q
I
E
D
N
R
C
Y
I
D
N
G
------
K
L
F
A
-
R
G
S
I
-
V
G
N
M
S
-
R
F
V
F
D
P
K
A
D
Y
G
--
G
V
G
E
-
N
L
Y
-----------
V
H
A
D
D
-
V
E
F
V
P
G
-
E
S
L
K
W
N
V
R
N
L
D
V
M
-
P
I
F
------------------------------------
E
T
L
A
L
--
R
L
V
L
Q
G
D
V
I
W
-
L
R
C
V
P
E
L
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
HHSearch
61.44
24%
14.66
* C7 *
2C8M
1
LPLAN_THEAC
A:
[77-117]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
A
V
-
Y
H
D
L
G
-
D
L
N
F
S
V
V
R
S
S
D
--
D
M
D
I
T
S
M
F
R
T
--------
M
N
E
A
V
V
-
N
S
L
R
I
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26
HHSearch
58.46
23%
33.18
- C4 -
2BOL
1
TSP36_TAESA
A:
[98-128]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
F
L
-
K
D
A
Y
E
V
G
K
D
G
-
R
L
H
F
K
V
Y
F
N
V
K
--
N
F
K
A
E
E
I
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
Fugue
55.84
25%
-13.19
- C7 -
1VF5
-
PETL_MASLA
E:
[1-32]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
I
L
G
A
V
F
Y
I
V
F
I
A
L
F
F
G
I
A
V
G
I
I
F
A
I
K
S
I
K
L
I
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
Fugue
54.03
9%
-25.88
- C6 -
3JVB
1
?
A:
[10-243]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
K
T
Y
V
Y
D
N
R
Y
W
K
N
L
G
G
V
I
K
N
A
K
R
R
K
H
E
E
K
------
V
E
R
E
-
F
D
S
L
------------
D
K
Y
L
V
A
--
E
D
P
F
C
G
P
G
K
N
--------
Q
K
L
T
L
F
-
K
E
I
R
N
I
-
K
P
D
T
M
K
L
I
V
N
W
S
G
-
K
E
F
L
R
---
E
T
-----------------------
W
T
R
F
M
E
D
S
F
P
I
VN
D
Q
E
V
M
D
V
F
L
V
-
I
N
M
R
S
T
K
PN
R
C
F
R
F
L
A
Q
H
-
A
L
R
Y
V
P
H
E
I
I
R
-
I
V
E
P
S
Y
V
G
N
---
N
E
Y
R
I
S
L
A
T
N
S
F
E
H
--------------------
F
I
N
--
K
P
I
V
Y
I
G
T
D
SA
E
D
E
E
V
L
F
E
V
S
L
V
F
K
I
K
E
F
A
P
D
A
-
P
L
F
S
G
PAY------------------------------------------------------
13
Fugue
50.04
25%
-22.48
- C7 -
2E74
-
PETL_MASLA
E:
[1-32]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
I
L
G
A
V
F
Y
I
V
F
I
A
L
F
F
G
I
A
V
G
I
I
F
A
I
K
S
I
K
L
I
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
Fugue
47.32
12%
15.62
- C7 -
2QDJ
-
A:
[1-304]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
E
E
P
D
F
T
A
L
C
Q
K
L
K
I
P
D
H
V
R
E
R
A
W
L
T
W
E
K
V
S
S
KK
K
E
L
W
G
I
C
I
-
F
I
A
A
-
V
D
L
D
E
M
S
F
T
F
T
E
L
Q
K
N
I
--
E
I
S
V
H
K
F
F
N
L
--------
L
K
E
I
D
T
S
T
K
V
D
N
A
M
S
R
L
L
K
K
Y
D
V
L
F
A
L
-
F
S
K
L
E
R
T
C
E
L
I
Y
L
T
Q
P
S
S
SISTEINS
A
L
V
L
K
V
S
W
I
T
F
L
L
A
K
G
E
V
--
L
D
D
L
V
I
S
F
Q
L
M
L
C
V
L
D
Y
F
-----
I
K
L
S
P
P
M
L
L
K
E
P
Y
K
T
A
V
I
D
T
R
I
I
E
V
L
C
K
---
E
H
E
C
N
I
D
E
V
K
N
V
Y
F
KN
F
I
P
F
M
N
SLLPE
V
E
N
L
S
K
R
Y
E
E
I
Y
L
K
N
K
D
L
D
A
R
------
L
F
L
D
H
D
K
T
L
Q
T
D
S
I
D
S
F
E
T
Q
R
------------------------------------------------------------
9
PsiBlast
47.25
29%
12.72
- C7 -
1NYR
-
SYT_STAAW
A:
[95-147]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
V
G
-
P
V
I
E
G
-
G
--
F
Y
Y
D
F
D
I
D
--
Q
N
I
S
S
D
D
F
E
Q
--------
I
E
K
T
M
K
-
Q
I
V
N
E
N
-
M
K
I
E
R
K
V
V
S
R
D
E
A
-
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
Fugue
46.43
13%
-11.56
- C6 -
3K30
3
?
A:
[7-690]
VAAPYDVLF
E
P
V
Q
IGPFTTKNR
F
Y
Q
V
PHCNGMGYRD
P
S
A
Q
A
S
M
R
K
I
K
A
E
G
GWS
A
V
C
T
E
QVEIHATSDIAP
F
I
E
L
R
IWDDQD
L
P
A
L
K
R
I
A
D
A
I
H
E
G
G
G
L
A
G
I
E
L
A
H
NGMNAPNQLSR
E
T
P
L
G
PGHLPVAPDTIAP
I
Q
A
R
AMT
K
Q
D
I
D
D
L
R
R
W
H
R
N
A
V
R
R
S
I
E
A
GYD
I
V
Y
VYGAHGYS
G
V
H
H
F
L
SKRYNQRTDEYGGS
L
E
N
R
M
R
L
L
R
E
L
L
E
D
T
L
D
E
C
A
GR
A
A
V
A
C
R
I
T
VEEEIDGGIT
R
E
D
I
E
G
V
L
R
E
LGELPD
L
W
D
F
A
M
GSWEGDSVTSRFAPEGRQEEFVAG
L
K
K
L
T
T
K
P
V
V
G
V
G
RFTS
P
D
A
M
V
R
Q
I
K
A
GILD
L
I
G
A
A
R
P
S
I
A
DPF
L
P
N
K
I
R
D
GRLNLIRECIGCN
I
C
V
S
G
D
L
T
MSPIRCTQNPSMGEEWRRGWHPERIRAKESD
A
R
V
L
V
V
G
AG
P
S
G
L
E
A
A
R
A
L
G
V
R
GYD
V
V
L
A
E
AGRDLG
G
R
V
T
Q
E
S
A
LPGLSAWG
R
V
K
E
Y
R
E
A
V
L
A
E
L
P
N
V
E
I
Y
R
E
S
P
M
T
G
D
D
I
V
E
F
G
F
E
------
H
V
I
T
A
T
G
A
T
-
W
R
T
D
G
-
V
A
R
F
H
T
T
-
A
L
P
--
I
A
E
G
M
Q
V
L
G
-------------
P
D
-
D
L
F
A
G
R
-
L
P
D
G
K
K
V
V
V
Y
D
D
D
-
H
Y
Y
L
G
G
V
V
A
E
-----------------------
L
L
A
Q
K
-------------
G
Y
E
V
S
-
I
V
T
P
G
A
Q
-----
V
S
S
W
T
N
-
N
T
------
F
E
V
-
N
R
I
Q
R
R
L
I
E
N
GV
A
R
V
T
D
H
A
V
V
A
V
G
A
G
--------------------
G
V
T
V
R
D
T
Y
A
S
I
E
R
E
------
L
E
C
D
A
V
V
M
V
T
A
R
L
P
R
E
E
L
-
Y
L
D
L
V
A
R
R
D
A
GEIA
S
V
R
G
I
G
DAWAPGT
I
A
A
A
V
W
S
G
R
R
A
A
E
E
FDAVLPSNDEVP
F
R
R
E
V
T
QLA
8
PsiBlast
45.17
29%
20.35
- C7 -
1NYQ
-
SYT_STAAW
A:
[95-147]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
V
G
-
P
V
I
E
G
-
G
--
F
Y
Y
D
F
D
I
D
--
Q
N
I
S
S
D
D
F
E
Q
--------
I
E
K
T
M
K
-
Q
I
V
N
E
N
-
M
K
I
E
R
K
V
V
S
R
D
E
A
-
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast
42.32
35%
67.44
- C7 -
2FTW
-
DPYS_DICDI
A:
[84-123]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
G
T
Q
-
A
A
V
A
G
-
G
T
T
F
I
I
D
F
V
I
P
T
R
G
Q
S
L
L
E
A
Y
D
Q
--------
W
K
K
W
A
D
-
E
K
V
N
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
Fugue
39.39
47%
129.05
- C7 -
2JQ0
-
PHYL1_PHYHY
A:
[1-18]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
L
S
L
---
I
P
H
A
I
N
A
V
S
A
I
A
K
H
N
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32
HHSearch
37.62
13%
-1.44
- C5 -
4AEQ
1
IMMM_ECOLX
A:
[12-96]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
Y
--
Q
V
S
D
E
Q
A
R
T
F
V
K
N
D
Y
L
Q
R
M
K
R
W
D
N
-
D
V
Q
L
L
G
-
T
E
-
I
P
K
I
T
W
E
K
I
E
R
S
L
T
D
V
E
D
E
K
T
-----------------------
L
L
V
P
F
K
A
E
G
----
P
D
G
K
R
M
Y
Y
G
M
-
Y
H
C
E
E
G
Y
-----
V
E
Y
A
------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
Fugue
35.30
25%
2.10
- C7 -
2D2C
1
PETL_MASLA
E:
[1-32]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
I
L
G
A
V
F
Y
I
V
F
I
A
L
F
F
G
I
A
V
G
I
I
F
A
I
K
S
I
K
L
I
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
User Run . : Multi Template Modeling Result:
.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200....
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MIIMNKFTILFLTLFLALPMAMKADSAKEKKDDTRYLVGAVPEVDGKVVFSKEFQIPGMSQAQIYDTMTKWMDERLKENKNIDSRIVFSDEAKGTIAGVGEEWIVFSSSALSLDRTLVNYQITVTCKPGNCLVELEKIRFTYRETEKYKAEEWITDKYALNKAKTKLVRGLAKWRRKTVDFADDMFMDVAVAFGAPDTRPKTEK
34
76.81
100%
-25.73
- C- -
M034
-
A:
[156-204]
-----------------------------------------------------------------------------------------------------------------------------------------------------------
D
K
Y
A
L
N
K
A
K
T
K
L
V
R
G
L
A
K
W
R
R
K
T
V
D
F
A
D
D
M
F
M
D
V
A
V
A
F
G
A
P
D
T
R
P
K
T
E
K
37
75.68
100%
-33.87
- C- -
M037
-
A:
[156-204]
-----------------------------------------------------------------------------------------------------------------------------------------------------------
D
K
Y
A
L
N
K
A
K
T
K
L
V
R
G
L
A
K
W
R
R
K
T
V
D
F
A
D
D
M
F
M
D
V
A
V
A
F
G
A
P
D
T
R
P
K
T
E
K
35
71.95
100%
-22.98
- C- -
M035
-
A:
[156-204]
-----------------------------------------------------------------------------------------------------------------------------------------------------------
D
K
Y
A
L
N
K
A
K
T
K
L
V
R
G
L
A
K
W
R
R
K
T
V
D
F
A
D
D
M
F
M
D
V
A
V
A
F
G
A
P
D
T
R
P
K
T
E
K
48
71.26
100%
-27.08
- C- -
M048
-
A:
[156-204]
-----------------------------------------------------------------------------------------------------------------------------------------------------------
D
K
Y
A
L
N
K
A
K
T
K
L
V
R
G
L
A
K
W
R
R
K
T
V
D
F
A
D
D
M
F
M
D
V
A
V
A
F
G
A
P
D
T
R
P
K
T
E
K
50
70.30
100%
-27.30
- C- -
M050
-
A:
[156-204]
-----------------------------------------------------------------------------------------------------------------------------------------------------------
D
K
Y
A
L
N
K
A
K
T
K
L
V
R
G
L
A
K
W
R
R
K
T
V
D
F
A
D
D
M
F
M
D
V
A
V
A
F
G
A
P
D
T
R
P
K
T
E
K