@tome V2.1
Ref.
-
-
Doc.
Global output mode :
Group entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Selected Ligands Contact
Catalytic Site Atlas
Show alignment :
Best alignments
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
Structural Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Modeller Score
Verify3D Model Score
QMean Model Score
Hide column
Complexes Prediction
Show Ligands of Templates
Comparative Docking Score
Virtual Screening Score
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Comparative Docking Tab
Atome Color :
Mutated
Helix
Strand
Conserved
Query sequence : >T0660: (2012-05-10 )
MYRALYAFRSAEPNALAFAAGETFLVLERSSAHWWLAARARSGETGYVPPAYLRRLQGLEQDVLQAIDRAIEAVHNTAMRDGGKYSLEQRGVLQKLIHHRKETLSRRG
Atome Classification :
.........10........20........30........40........50........60........70........80........90........100.......110.......120.......
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-----MYRALYAFRSA-EPNALAFAAGETFLVLERS-SAHWWLAAR---ARSGETGYVPPAYLRRLQGLEQD------VLQA----IDRAIEAVHNTAMRDGGKYSLEQRGVLQKLIHHRKETLSRRG
1
PsiBlast
83.21
36%
-123.76
- C2 -
3CQT
-
A:
[7-62]
-----
L
F
E
A
L
Y
D
Y
E
A
R
-
T
E
D
D
L
S
F
H
K
G
E
K
F
Q
I
L
N
S
S
-
E
G
D
W
W
E
A
R
S
---
L
T
T
G
E
T
G
Y
I
P
S
I
Y
L
A
P
V
--------------------------------------------------------------
40
HHSearch
72.51
22%
-83.71
- C2 -
1QCF
-
HCK_HUMAN
A:
[10-113]
-----
I
V
V
A
L
Y
D
Y
E
A
I
-
H
H
E
D
L
S
F
Q
K
G
D
Q
M
V
V
L
E
E
--
S
G
E
W
W
K
A
R
S
---
L
A
T
R
K
E
G
Y
I
P
S
N
Y
V
A
R
V
D
S
L
E
T
E
------
E
W
F
F
KGIS
R
K
D
A
E
R
Q
L
L
A
P
G
N
M
L
G
S
F
M
I
R
D
S
E
T
T
K
G
S
Y
S
L
S
V
R
D
Y
-----
2
PsiBlast
69.99
33%
-114.10
- C2 -
3UF4
5
A:
[6-65]
-----
L
F
V
A
L
Y
D
Y
E
A
R
-
T
E
D
D
L
S
F
H
K
G
E
K
F
Q
I
L
N
S
S
-
E
G
D
W
W
E
A
R
S
---
L
T
T
G
E
T
G
Y
I
P
S
N
Y
V
A
P
V
D
S
I
Q
----------------------------------------------------------
5
PsiBlast
69.34
33%
-130.70
- C2 -
1NYF
-
A:
[5-60]
-----
L
F
V
A
L
Y
D
Y
E
A
R
-
T
E
D
D
L
S
F
H
K
G
E
K
F
Q
I
L
N
S
S
-
E
G
D
W
W
E
A
R
S
---
L
T
T
G
E
T
G
Y
I
P
S
N
Y
V
A
P
V
--------------------------------------------------------------
4
PsiBlast
66.57
33%
-128.93
- C2 -
1AZG
1
B:
[5-60]
-----
L
F
V
A
L
Y
D
Y
E
A
R
-
T
E
D
D
L
S
F
H
K
G
E
K
F
Q
I
L
N
S
S
-
E
G
D
W
W
E
A
R
S
---
L
T
T
G
E
T
G
Y
I
P
S
N
Y
V
A
P
V
--------------------------------------------------------------
31
SP3
64.70
16%
-118.27
- C2 -
1FMK
-
?
?:
[1-62]
--MV
T
T
F
V
A
L
Y
D
Y
E
S
R
-
T
E
T
D
L
S
F
K
K
G
E
R
L
Q
I
V
N
N
T
-
E
G
D
W
W
L
A
H
S
---
L
S
T
G
Q
T
G
Y
I
P
S
N
Y
V
A
P
S
D
S
I
Q
A
---------------------------------------------------------
7
PsiBlast
64.58
33%
-137.49
- C2 -
1A0N
1
B:
[7-62]
-----
L
F
V
A
L
Y
D
Y
E
A
R
-
T
E
D
D
L
S
F
H
K
G
E
K
F
Q
I
L
N
S
S
-
E
G
D
W
W
E
A
R
S
---
L
T
T
G
E
T
G
Y
I
P
S
N
Y
V
A
P
V
--------------------------------------------------------------
9
PsiBlast
64.31
37%
-126.83
- C2 -
3H0I
-
FYN_HUMAN
A:
[17-69]
-----
L
F
V
A
L
Y
D
Y
E
A
I
-
T
E
D
D
L
S
F
H
K
G
E
K
F
Q
I
L
N
S
S
-
E
G
D
W
W
E
A
R
S
---
L
T
T
G
E
T
G
Y
I
P
S
N
Y
V
-----------------------------------------------------------------
10
PsiBlast
64.20
37%
-128.34
- C2 -
2L2P
-
A:
[9-61]
-----
L
F
E
A
L
Y
D
Y
E
A
R
-
T
E
D
D
L
S
F
H
K
G
E
K
F
Q
I
L
N
S
S
-
E
G
D
W
W
E
V
R
S
---
L
T
T
G
E
T
G
Y
I
P
S
P
Y
L
-----------------------------------------------------------------
22
Fugue
63.75
16%
-124.49
- C2 -
1WDX
-
BBC1_YEAST
A:
[5-67]
PEVP
F
K
V
V
A
Q
F
P
Y
K
S
D
-
Y
E
D
D
L
N
F
E
K
D
Q
E
I
I
V
T
S
V
E
-
D
A
E
W
Y
F
G
E
Y
Q
D
S
N
G
D
V
I
E
G
I
F
P
K
S
F
V
A
V
---------------------------------------------------------------
8
PsiBlast
63.71
37%
-120.81
- C2 -
3H0H
1
A:
[17-69]
-----
L
F
V
A
L
Y
D
Y
E
A
I
-
T
E
D
D
L
S
F
H
K
G
E
K
F
Q
I
L
N
S
S
-
E
G
D
W
W
E
A
R
S
---
L
T
T
G
E
T
G
Y
I
P
S
N
Y
V
-----------------------------------------------------------------
11
PsiBlast
63.45
33%
-119.50
- C2 -
1M27
-
C:
[3-61]
-----
L
F
V
A
L
Y
D
Y
E
A
R
-
T
E
D
D
L
S
F
H
K
G
E
K
F
Q
I
L
N
S
S
-
E
G
D
W
W
E
A
R
S
---
L
T
T
G
E
T
G
Y
I
P
S
N
Y
V
A
P
V
D
S
I
-----------------------------------------------------------
13
PsiBlast
63.27
37%
-125.74
- C2 -
1FYN
1
A:
[6-58]
-----
L
F
V
A
L
Y
D
Y
E
A
R
-
T
E
D
D
L
S
F
H
K
G
E
K
F
Q
I
L
N
S
S
-
E
G
D
W
W
E
A
R
S
---
L
T
T
G
E
T
G
Y
I
P
S
N
Y
V
-----------------------------------------------------------------
3
PsiBlast
62.96
33%
-113.74
- C2 -
1G83
-
FYN_HUMAN
A:
[5-64]
-----
L
F
V
A
L
Y
D
Y
E
A
R
-
T
E
D
D
L
S
F
H
K
G
E
K
F
Q
I
L
N
S
S
-
E
G
D
W
W
E
A
R
S
---
L
T
T
G
E
T
G
Y
I
P
S
N
Y
V
A
P
V
D
S
I
Q
----------------------------------------------------------
6
PsiBlast
62.66
33%
-127.35
- C2 -
1NYG
-
A:
[5-60]
-----
L
F
V
A
L
Y
D
Y
E
A
R
-
T
E
D
D
L
S
F
H
K
G
E
K
F
Q
I
L
N
S
S
-
E
G
D
W
W
E
A
R
S
---
L
T
T
G
E
T
G
Y
I
P
S
N
Y
V
A
P
V
--------------------------------------------------------------
15
PsiBlast
62.29
37%
-124.83
- C2 -
1SHF
-
FYN_HUMAN
A:
[3-55]
-----
L
F
V
A
L
Y
D
Y
E
A
R
-
T
E
D
D
L
S
F
H
K
G
E
K
F
Q
I
L
N
S
S
-
E
G
D
W
W
E
A
R
S
---
L
T
T
G
E
T
G
Y
I
P
S
N
Y
V
-----------------------------------------------------------------
32
SP3
62.20
12%
-122.86
- C2 -
1RUW
1
A:
[1-69]
--K
D
P
K
F
E
A
A
Y
D
F
P
G
S
G
S
S
S
E
L
P
L
K
K
G
D
I
V
F
I
S
R
D
E
-
P
S
G
W
S
L
A
K
L
---
L
D
G
S
K
E
G
W
V
P
T
A
Y
M
T
P
Y
K
D
T
R
N
T
------
V
P
V
-----------------------------------------------
43
HHSearch
62.16
16%
-88.07
- C2 -
1K9A
-
CSK_RAT
A:
[14-121]
------
C
I
A
K
Y
N
F
H
G
T
-
A
E
Q
D
L
P
F
C
K
G
D
V
L
T
I
V
A
V
T
K
D
P
N
W
Y
K
A
K
----
N
K
V
G
R
E
G
I
I
P
A
N
Y
V
Q
K
R
E
G
V
K
A
G
TKLSLM
P
W
F
H
GKIT
R
E
Q
A
E
R
L
L
Y
P
--
P
E
T
G
L
F
L
V
R
E
S
T
N
Y
P
G
D
Y
T
L
C
V
S
-------
44
HHSearch
61.46
21%
-95.85
- C2 -
2H8H
-
SRC_HUMAN
A:
[87-189]
-----
T
F
V
A
L
Y
D
Y
E
S
R
-
T
E
T
D
L
S
F
K
K
G
E
R
L
Q
I
V
N
N
T
-
E
G
D
W
W
L
A
H
S
---
L
S
T
G
Q
T
G
Y
I
P
S
N
Y
V
A
P
S
D
S
I
Q
A
E
------
E
W
Y
F
GKIT
R
R
E
S
E
R
L
L
L
N
A
E
N
P
R
G
T
F
L
V
R
E
S
E
T
T
K
G
A
Y
C
L
S
V
S
-------
14
PsiBlast
60.50
37%
-118.90
- C2 -
3H0F
1
A:
[17-69]
-----
L
F
V
A
L
Y
D
Y
E
A
W
-
T
E
D
D
L
S
F
H
K
G
E
K
F
Q
I
L
N
S
S
-
E
G
D
W
W
E
A
R
S
---
L
T
T
G
E
T
G
Y
I
P
S
N
Y
V
-----------------------------------------------------------------
User Run . : Multi Template Modeling Result:
.........10........20........30........40........50........60........70........80........90........100.......
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MYRALYAFRSAEPNALAFAAGETFLVLERSSAHWWLAARARSGETGYVPPAYLRRLQGLEQDVLQAIDRAIEAVHNTAMRDGGKYSLEQRGVLQKLIHHRKETLSRRG
83
100.00
100%
?
- C- -
M083
-
A:
[1-59]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
R
R
L
Q
G
L
-------------------------------------------------
82
100.00
100%
?
- C- -
M082
-
A:
[1-56]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
R
R
L
----------------------------------------------------
81
100.00
100%
?
- C- -
M081
-
A:
[1-56]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
R
R
L
----------------------------------------------------
77
100.00
100%
?
- C- -
M077
-
A:
[1-56]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
R
R
L
----------------------------------------------------
76
100.00
100%
?
- C- -
M076
-
A:
[1-53]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
-------------------------------------------------------
75
100.00
100%
?
- C- -
M075
-
A:
[1-53]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
-------------------------------------------------------
71
100.00
100%
?
- C- -
M071
-
A:
[1-56]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
R
R
L
----------------------------------------------------
70
100.00
100%
?
- C- -
M070
-
A:
[1-56]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
R
R
L
----------------------------------------------------
69
100.00
100%
?
- C- -
M069
-
A:
[1-56]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
R
R
L
----------------------------------------------------
65
100.00
100%
?
- C- -
M065
-
A:
[1-112]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
R
R
L
Q
G
L
E
Q
D
V
L
Q
A
I
D
R
A
I
E
A
V
H
N
T
A
M
R
D
G
G
K
Y
S
L
E
Q
R
G
V
L
Q
K
L
I
H
H
R
K
E
T
L
S
R
R
G
64
100.00
100%
?
- C- -
M064
-
A:
[1-112]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
R
R
L
Q
G
L
E
Q
D
V
L
Q
A
I
D
R
A
I
E
A
V
H
N
T
A
M
R
D
G
G
K
Y
S
L
E
Q
R
G
V
L
Q
K
L
I
H
H
R
K
E
T
L
S
R
R
G
63
100.00
100%
?
- C- -
M063
-
A:
[1-112]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
R
R
L
Q
G
L
E
Q
D
V
L
Q
A
I
D
R
A
I
E
A
V
H
N
T
A
M
R
D
G
G
K
Y
S
L
E
Q
R
G
V
L
Q
K
L
I
H
H
R
K
E
T
L
S
R
R
G
62
100.00
100%
?
- C- -
M062
-
A:
[1-112]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
R
R
L
Q
G
L
E
Q
D
V
L
Q
A
I
D
R
A
I
E
A
V
H
N
T
A
M
R
D
G
G
K
Y
S
L
E
Q
R
G
V
L
Q
K
L
I
H
H
R
K
E
T
L
S
R
R
G
61
100.00
100%
?
- C- -
M061
-
A:
[1-112]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
R
R
L
Q
G
L
E
Q
D
V
L
Q
A
I
D
R
A
I
E
A
V
H
N
T
A
M
R
D
G
G
K
Y
S
L
E
Q
R
G
V
L
Q
K
L
I
H
H
R
K
E
T
L
S
R
R
G
60
100.00
100%
?
- C- -
M060
-
A:
[1-112]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
R
R
L
Q
G
L
E
Q
D
V
L
Q
A
I
D
R
A
I
E
A
V
H
N
T
A
M
R
D
G
G
K
Y
S
L
E
Q
R
G
V
L
Q
K
L
I
H
H
R
K
E
T
L
S
R
R
G
80
90.50
100%
-133.05
- C- -
M080
-
A:
[1-56]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
R
R
L
----------------------------------------------------
66
84.62
100%
-138.37
- C- -
M066
-
A:
[1-56]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
R
R
L
----------------------------------------------------
78
84.57
100%
-134.81
- C- -
M078
-
A:
[1-59]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
R
R
L
Q
G
L
-------------------------------------------------
74
81.73
100%
-129.06
- C- -
M074
-
A:
[1-53]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
-------------------------------------------------------
68
80.01
100%
-138.45
- C- -
M068
-
A:
[1-56]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
R
R
L
----------------------------------------------------
79
78.61
100%
-131.05
- C- -
M079
-
A:
[1-56]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
R
R
L
----------------------------------------------------
67
77.41
100%
-140.52
- C- -
M067
-
A:
[1-56]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
R
R
L
----------------------------------------------------
73
75.30
100%
-126.79
- C- -
M073
-
A:
[1-53]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
-------------------------------------------------------
72
70.89
100%
-123.60
- C- -
M072
-
A:
[1-56]
M
Y
R
A
L
Y
A
F
R
S
A
E
P
N
A
L
A
F
A
A
G
E
T
F
L
V
L
E
R
S
S
A
H
W
W
L
A
A
R
A
R
S
G
E
T
G
Y
V
P
P
A
Y
L
R
R
L
----------------------------------------------------