@tome V2.1
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Doc.
Global output mode :
Group entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Selected Ligands Contact
Catalytic Site Atlas
Show alignment :
Best alignments
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
Structural Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Modeller Score
Verify3D Model Score
QMean Model Score
Hide column
Complexes Prediction
Show Ligands of Templates
Comparative Docking Score
Virtual Screening Score
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Comparative Docking Tab
Atome Color :
Mutated
Helix
Strand
Conserved
Query sequence : >T0646: (2012-05-02 )
MQEERKKLLEKLEKILDEVTDGAPDEARERIEKLAKDVKDELEEGDAKNMIEKFRDEMEQMYKDAPNAVMEQLLEEIEKLLKKAGSLVPRGSY
Atome Classification :
.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.....
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MQ-----EERKKLLEKLEKILDE--------V------T---------------D---GA-----P--DE----A-RE-RIEK--LAKDV-----KDELE---E-GD--A----K-------NMIE----------KFR------DEMEQM--------YKDAP---------N------AV--------MEQLLEEIEKLLKKAGSLVPR-G-----SY------------
21
Fugue
84.77
17%
-58.31
- C4 -
1P68
-
?
A:
[1-102]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
Y
-----
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K
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N
D
L
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E
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L
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L
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N
--------
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H
K
N
WHG
G
---------------
K
---
D
N
-----
L
--
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----
V
-
D
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H
L
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N
--
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-----
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---
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----------
E
M
M
------
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V
--------
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---------
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H
LQGG
K
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T
--------
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I
E
Q
N
I
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E
I
F
H
H
L
E
E
L
V
H
R
---------------------
1
PsiBlast
83.89
27%
-33.48
- C4 -
1HY0
-
ARLY1_ANAPL
A:
[57-148]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
-----
T
E
L
E
K
I
L
S
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L
E
K
I
S
E
E
--------
L
------
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---------------
K
---
G
V
IVVTQ
S
--
D
E
D
I
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T
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-
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E
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R
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E
--
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-----
A
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---
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--
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----------
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------
T
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--------
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K
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---------
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------
I
I
--------
S
T
H
L
L
Q
L
I
K
T
L
V
E
R
A
A
--------------------------
2
PsiBlast
82.53
27%
-35.18
- C4 -
1HY0
-
ARLY1_ANAPL
B:
[57-148]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
-----
T
E
L
E
K
I
L
S
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L
E
K
I
S
E
E
--------
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------
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---------------
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---
G
V
IVVTQ
S
--
D
E
DIQT
A
-
N
E
R
R
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E
--
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-----
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---
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-------
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--
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------
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I
--------
S
T
H
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L
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L
I
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T
L
V
E
R
A
A
--------------------------
47
SP3
79.00
18%
-39.76
- C4 -
1FJG
-
RS20_THET8
T:
[8-106]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
N
-----
L
S
A
L
K
R
H
R
Q
S
L
K
R
R
L
R
--------
N
------------------------------------
K
A
----
K
-
K
S
-
A
I
K
T
--
L
S
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K
A
-----
V
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A
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---
E
-
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-------
E
A
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----------
I
M
R
------
K
A
E
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--------
D
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A
A
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GSTLHKNAA
A
------
R
R
--------
K
S
R
L
M
R
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R
Q
L
L
E
A
A
G
A
P
L
I
G
-
G
-----
G
L
SA----------
46
SP3
75.58
20%
-61.91
- C4 -
1M7K
-
A:
[19-99]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPP
S
I
-----
K
K
I
I
H
V
L
E
K
V
Q
Y
L
E
Q
E
--------
V
------
E
---------------
E
FVG
K
K
-----
T
--
D
K
----
A
-
Y
W
-
L
L
E
E
--
M
L
T
K
E
-----
L
L
E
L
D
---
S
-
V
E
--
T
----
G
-------
G
---------------
Q
------
D
S
V
R
Q
A
--------
R
K
E
A
----------
V
------
C
K
--------
I
Q
A
I
L
E
K
L
E
K
----
K
G
--------------------------
23
Fugue
75.15
17%
-55.97
- C4 -
1V9V
-
A:
[1-114]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSS
G
P
-----
K
A
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M
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Y
APGARLA
L
------
A
---------------
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---
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L
--
G
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----
I
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-
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T---
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M
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------
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--------
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A
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---------
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------
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--------
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V
R
K
L
L
I
I
I
S
R
-
P
-----
A
R
S
G
PSSG------
32
HHSearch
73.38
20%
-69.46
- C4 -
1U00
-
A:
[150-215]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
V
L
E
S
L
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G
A
L
A
A
--------
D
------
A
---------------
A
---
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-----
S
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A
A
----
E
-
R
Q
-
V
I
D
D
--
A
A
A
H
L
-----
S
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A
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---
G
-
D
D
--
V
------------
D
A
I
E
----------
Q
A
I
------
K
N
V
D
K
Q
--------
T
Q
D
F
A
---------
A
------
R
R
--------
M
D
Q
S
--------------------------------------
3
PsiBlast
73.06
30%
-26.88
- C4 -
1VMB
1
RS6_THEMA
A:
[33-109]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
-----
E
E
R
E
N
L
V
E
R
V
K
K
I
I
E
E
--------
R
------
V
---------------
K
---
G
K
-----
I
--
D
K
----
V
E
R
M
-
G
M
R
K
--
F
A
Y
E
I
-----
K
-
K
F
N
---
E
-
G
D
--
Y
----
T
-------
V
I
Y
------------
F
R
C
DGQN
L
Q
E
L
E
N
F
--------
Y
R
V
T
P
---------
E
------
I
I
--------
R
W
Q
T
F
-------------------------------------
22
Fugue
70.08
15%
-69.22
- C4 -
3F2E
1
?
A:
[8-90]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
T
A
V
A
E
Q
V
S
A
V
L
S
Q
--------
Y
--------------------------
G
I
-----
T
--
G
P
----
N
-
R
A
-
I
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Q
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--
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K
V
-----
A
R
A
L
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---
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-
L
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-------
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A
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V
----------
N
M
I
------
N
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L
K
A
Y
--------
Y
I
S
A
F
---------
N
------
A
---------
N
P
T
V
L
D
A
V
T
D
I
I
T
G
S
----
P
T
-
G
-----
Y
V
S-----------
27
Fugue
68.67
18%
-59.46
- C4 -
2HFI
-
YPPE_BACSU
A:
[1-123]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLSQ
T
L
L
-----
E
M
T
E
Q
M
I
E
V
A
E
K
G
A
D
R
--------
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------
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E
GKNSN
H
S
Y
D
FFE
T
I
K
---
P
A
-----
V
--
E
E
----
N
-
D
E
-
L
A
A
R
--
W
A
E
G
A
-----
L
E
L
I
K
---
V
-
R
R
--
P
KYVH
K
-------
E
Q
I
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----------
A
V
K
------
D
N
F
L
E
L
--------
V
L
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V
HHIH----
K
------
K
R
--------
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I
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L
Y
T
L
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A
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E
D
-----
S
R
------------
48
SP3
66.09
19%
-35.93
- C4 -
1HB6
1
ACBP_BOVIN
A:
[1-86]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
Q
-----
A
E
F
D
K
A
A
E
E
V
K
H
L
------------------
K
---------------
T
---
K
P
-----
A
--
D
E
----
E
-
M
L
-
F
I
Y
S
--
H
Y
K
Q
A
-----
T
-------
V
-
G
D
--
I
----
N
TERPGML
D
F
K
G
----------
K
A
K
------
W
D
A
W
N
E
--------
L
K
G
T
S
K
--------
E
------
D
A
--------
M
K
A
Y
I
D
K
V
E
E
L
K
K
K
Y
G
I
-------------------------
34
HHSearch
63.86
26%
-69.63
- C4 -
1DKX
-
A:
[154-206]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
L
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--------
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------
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---------------
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---
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A
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--
A
L
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A
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T
A
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---
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-
E
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--
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----
A
--------
A
I
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----------
A
K
M
------
Q
E
L
A
Q
V
---------------------------------------------------------------------------------
26
Fugue
60.58
11%
-30.94
- C4 -
1NLX
23
MPAP6_PHLPR
A:
[4-107]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
T
-----
T
E
E
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P---
P
-
A
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Y
K
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--
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A
A
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N
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--
A
----
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-------
A
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K
AP--------
Q
L
V
------
P
K
L
D
E
V
--------
Y
N
A
A
Y
---------
N
------
A
A
D
H
AAPED
K
Y
E
A
F
V
L
H
F
S
E
A
L
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I
A
G
T
P
E
V
-
H
-----
A
V
------------
45
SP3
60.47
22%
-74.73
- C4 -
1HX1
-
B:
[1-112]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GNS
P
Q
E
-----
E
V
E
L
K
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K
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V
E
K
--------
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E
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E
-
L
T
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G
I
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GF
L
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Q
A
E
A
L
C
K
L
D
-
R
R
--
V
----
K
-------
A
T
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E
----------
Q
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M
------
K
I
L
E
E
I
D
T
L
I
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P
EN
F
K
D
S
----------
R
------
L
K
--------
R
K
G
L
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K
K
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Q
A
F
L
A
E
C
D
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V
E
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N
-
I
-----
C
Q
E-----------
50
SP3
58.01
16%
-57.72
- C4 -
1KDX
-
A:
[1-81]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
V
R
K
G
W
H
E
H
--------
V
------
T
--------------------------
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--
D
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----
R
-
S
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--
L
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A
I
FPTPD
P
A
A
L
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M
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-------
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L
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Y
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M
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E
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A
N
S
R
-------
D
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E
Y
--------
Y
H
L
L
A
E
K
I
Y
K
I
Q
K
E
L
E
E
-------------------------
44
SP3
57.50
15%
-63.65
- C4 -
1CUN
-
SPTA2_CHICK
A:
[110-213]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
F
V
A
N
V
E
E
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E
A
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E
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Y
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D
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T
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L
A
----
A
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I
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G
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E
A
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E
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F
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-------
D
V
C
A
----------
N
G
E
------
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L
I
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--------
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H
V
E
N
I
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T
------
A
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--------
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---
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A-----------
36
HHSearch
56.04
27%
-48.33
- C4 -
1URF
-
A:
[1-71]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
I
-----
P
--
A
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----
N
-
L
S
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R
V
A
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--
L
E
K
Q
L
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A
I
E
L
K
---
V
K
Q
G
--
A
----
E
-------
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M
I
Q
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Y
S
N
GSTKD
R
K
L
L
------
L
T
A
Q
Q
M
--------
L
Q
D
S
----------
K
------
T
K
--------
I
D
I
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R
M
Q
L
R
R
A
L
Q
-----------------------------
28
Fugue
52.75
8%
-52.15
- C4 -
2FUG
-
?
?:
[7-438]
S
G
L
D
P
RFERTLYAHVGKEGSWT
L
D
Y
Y
L
R
H
GGY
E
T
A
K
R
V
L
K
EKT
P
D
E
V
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E
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R
S
GLRGRGGAGFP
T
G
L
K
W
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F
MPKDDG
K
Q
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Y
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C
NADESEPGSFKD
R
Y
I
L
E
DV
P
H
L
L
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M
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A
G
Y
A
I
RAT
V
G
Y
I
Y
V
RGEY
R
R
A
A
D
R
L
E
Q
A
I
K
E
A
R
A
R
GYLGKNLFGTD
F
S
F
D
L
H
V
H
R
G
A
GAYICGE
E
T
A
L
M
N
S
L
E
GLRANPRLKPPFPAQSGLWGKP
T
T
I
N
N
V
E
T
L
A
S
V
V
P
I
M
E
R
G
A
D
W
F
A
Q
M
GTEQSKGMKL
Y
Q
I
S
G
PVK
R
P
G
V
Y
ELPMGTT
F
R
E
L
I
YEWAGGPLEPIQ
A
I
I
P
GGSS
T
P
P
L
P
FT
E
E
V
L
D
TPMSYE
H
L
Q
A
K
G
S
M
L
G
TG
G
V
I
L
I
-----
P
E
R
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A
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--------
Y
------
A
---------------
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E
SC
G
K
-----
C
--
T
P
----
C
-
R
E
-
G
V
A
G
--
F
M
V
N
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-----
F
A
K
I
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---
T
-
G
Q
--
G
E---
E
-------
K
D
V
E
----------
N
L
E
------
A
L
L
P
L
I
--------
E
G
R
S
F
---------
C
------
P
L
--------
A
D
A
A
V
W
P
V
K
G
S
L
R
H
F
K
D
Q
Y
L
A
-
L
-----
A
R
E
KRPVPRPSLWR
41
SP3
49.03
10%
-62.74
- C4 -
1JT6
6
QACR_STAAU
A:
[2-72]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
L
K
D
K
I
L
G
V
A
K
E
L
F
I
K
--------
N
G-----
Y
---------------
N
---
A
T
-------------------
T
T
G
E
--
I
V
K
L
S
---------------
E
S
--
S
----
K
-------
G
N
L
Y
----------
Y
H
F
------
K
T
K
E
N
L
--------
F
L
E
I
L
---------
N
------
I
E
--------
E
S
K
W
Q
E
Q
W
K
K
E
Q
I
K
A
---------------------------
29
Fugue
48.27
7%
-25.67
- C4 -
1BS2
-
SYRC_YEAST
A:
[484-607]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DT
G
P
Y
L
Q
Y
A
H
S
R
L
R
S
V
E
RNAS
G
I
T
Q
E
K
W
I
N
ADFSLL
K
E
-----
P
A
A
K
L
L
I
R
L
L
G
Q
Y
P
D
V
--------
L
------
R
---------------
N
---
A
I
-----
K
--
T
H
----
E
-
P
T
-
T
V
V
T
--
Y
L
F
K
L
-----
T
H
Q
V
S
---
S
-
C
Y
--
D
----
V
-------
L
W
V
A
----------
G
----------
Q
T
E
E
--------
L
A
T
A
R
---------
L
------
A
L
--------
Y
G
A
A
R
Q
V
L
Y
N
G
M
R
L
L
G
L
T
P
V
E
-
R
-----
M
-------------
User Run . : Multi Template Modeling Result:
.........10........20........30........40........50........60........70........80........90...
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MQEERKKLLEKLEKILDEVTDGAPDEARERIEKLAKDVKDELEEGDAKNMIEKFRDEMEQMYKDAPNAVMEQLLEEIEKLLKKAGSLVPRGSY
63
94.39
100%
-83.04
- C- -
M063
-
A:
[1-135]
M
Q
E
E
R
K
K
L
L
E
K
L
E
K
I
L
D
E
V
T
D
G
A
P
D
E
A
R
E
R
I
E
K
L
A
K
D
V
K
D
E
L
E
E
G
D
A
K
N
M
I
E
K
F
R
D
E
M
E
Q
M
Y
K
D
A
P
N
A
V
M
E
Q
L
L
E
E
I
E
K
L
L
K
K
A
G
S
L
V
P
R
G
S
Y
64
93.82
100%
-67.60
- C- -
M064
-
A:
[1-105]
M
Q
E
E
R
K
K
L
L
E
K
L
E
K
I
L
D
E
V
T
D
G
A
P
D
E
A
R
E
R
I
E
K
L
A
K
D
V
K
D
E
L
E
E
G
D
A
K
N
M
I
E
K
F
R
D
E
M
E
Q
M
Y
K
D
A
P
N
A
V
M
E
Q
L
L
E
E
I
E
K
L
L
K
K
A
G
S
L
V
P
R
G
S
Y
65
87.57
100%
-50.25
- C- -
M065
-
A:
[1-135]
M
Q
E
E
R
K
K
L
L
E
K
L
E
K
I
L
D
E
V
T
D
G
A
P
D
E
A
R
E
R
I
E
K
L
A
K
D
V
K
D
E
L
E
E
G
D
A
K
N
M
I
E
K
F
R
D
E
M
E
Q
M
Y
K
D
A
P
N
A
V
M
E
Q
L
L
E
E
I
E
K
L
L
K
K
A
G
S
L
V
P
R
G
S
Y
58
52.32
100%
64.82
- C- -
M058
-
A:
[2-112]
M
Q
E
E
R
K
K
L
L
E
K
L
E
K
I
L
D
E
V
T
D
G
A
P
D
E
A
R
E
R
I
E
K
L
A
K
D
V
K
D
E
L
E
E
G
D
A
K
N
M
I
E
K
F
R
D
E
M
E
Q
M
Y
K
D
A
P
N
A
V
M
E
Q
L
L
E
E
I
E
K
L
L
K
K
A
G
S
L
V
P
R
G
S
Y
70
42.02
100%
96.22
- C- -
M070
-
A:
[7-73]
M
Q
E
E
R
K
K
L
L
E
K
L
E
K
I
L
D
E
V
T
D
G
A
P
D
E
A
R
E
R
I
E
K
L
A
K
D
V
K
D
E
L
E
E
G
D
A
K
N
M
I
E
K
F
R
D
E
M
E
Q
M
Y
K
D
A
P
N
A
V
M
E
Q
L
--------------------